RNA–Protein interactions for RNA: ENST00000454568.1

RFC3P1-201, Transcript of replication factor C 3 pseudogene 1, humanhuman

BASIC

Gene RFC3P1, Length 682 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P1-201ENST00000454568 AEBP2Q6ZN18 517 aaPredicted RBP33.28■■■□□ 2.92
RFC3P1-201ENST00000454568 CHIC1Q5VXU3 224 aa31.58■■■□□ 2.65
RFC3P1-201ENST00000454568 SENP3Q9H4L4 574 aaPredicted RBP28.64■■■□□ 2.18
RFC3P1-201ENST00000454568 PHF23Q9BUL5 403 aaPredicted RBP28.14■■■□□ 2.1
RFC3P1-201ENST00000454568 FOXD1Q16676 465 aa26.57■■□□□ 1.84
RFC3P1-201ENST00000454568 PLPPR3Q6T4P5 718 aa25.24■■□□□ 1.63
RFC3P1-201ENST00000454568 MSH5O43196 834 aa25.11■■□□□ 1.61
RFC3P1-201ENST00000454568 PIAS4Q8N2W9 510 aaPredicted RBP24.87■■□□□ 1.57
RFC3P1-201ENST00000454568 POTEDQ86YR6 584 aa24.65■■□□□ 1.54
RFC3P1-201ENST00000454568 PPP6R1Q9UPN7 881 aa24.63■■□□□ 1.53
RFC3P1-201ENST00000454568 ADRA2BP18089 450 aa24.58■■□□□ 1.53
RFC3P1-201ENST00000454568 SCAF1Q9H7N4 1312 aaKnown RBP22.75■■□□□ 1.23
RFC3P1-201ENST00000454568 DMRT2Q9Y5R5 561 aa22.63■■□□□ 1.21
RFC3P1-201ENST00000454568 MAPK8IP2Q13387 824 aaPredicted RBP22.59■■□□□ 1.21
RFC3P1-201ENST00000454568 PPP4R3CPQ6ZMV5 832 aa22.02■■□□□ 1.12
RFC3P1-201ENST00000454568 HOXD11P31277 338 aaPredicted RBP21.73■■□□□ 1.07
RFC3P1-201ENST00000454568 DCAF8L1A6NGE4 600 aa21.72■■□□□ 1.07
RFC3P1-201ENST00000454568 CNKSR2Q8WXI2 1034 aa21.71■■□□□ 1.07
RFC3P1-201ENST00000454568 CACNB1Q02641 598 aaPredicted RBP21.59■■□□□ 1.05
RFC3P1-201ENST00000454568 RNF216Q9NWF9 866 aaPredicted RBP21.55■■□□□ 1.04
RFC3P1-201ENST00000454568 RNF39Q9H2S5 420 aa21.31■■□□□ 1
RFC3P1-201ENST00000454568 NCBP3Q53F19 620 aaKnown RBP21.27■■□□□ 1
RFC3P1-201ENST00000454568 DNAJC5BQ9UF47 199 aa21.14■□□□□ 0.97
RFC3P1-201ENST00000454568 C1QBPQ07021 282 aaKnown RBP21.09■□□□□ 0.97
RFC3P1-201ENST00000454568 NISCHQ9Y2I1 1504 aa20.9■□□□□ 0.94
RFC3P1-201ENST00000454568 NPM3O75607 178 aaKnown RBP20.79■□□□□ 0.92
RFC3P1-201ENST00000454568 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.75■□□□□ 0.91
RFC3P1-201ENST00000454568 KCNA4P22459 653 aa20.2■□□□□ 0.82
RFC3P1-201ENST00000454568 U3KPZ7 1027 aaPredicted RBP20.19■□□□□ 0.82
RFC3P1-201ENST00000454568 CAPN15O75808 1086 aa20.01■□□□□ 0.79
RFC3P1-201ENST00000454568 SPINK5Q9NQ38 1064 aaPredicted RBP19.92■□□□□ 0.78
RFC3P1-201ENST00000454568 APLP2Q06481 763 aa19.89■□□□□ 0.77
RFC3P1-201ENST00000454568 DSG3P32926 999 aa19.88■□□□□ 0.77
RFC3P1-201ENST00000454568 SLC4A2P04920 1241 aa19.85■□□□□ 0.77
RFC3P1-201ENST00000454568 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.79■□□□□ 0.76
RFC3P1-201ENST00000454568 HNRNPUL2Q1KMD3 747 aaKnown RBP19.79■□□□□ 0.76
RFC3P1-201ENST00000454568 ZNF219Q9P2Y4 722 aaPredicted RBP19.68■□□□□ 0.74
RFC3P1-201ENST00000454568 SAMD1Q6SPF0 538 aaPredicted RBP19.62■□□□□ 0.73
RFC3P1-201ENST00000454568 TRHP20396 242 aaPredicted RBP19.61■□□□□ 0.73
RFC3P1-201ENST00000454568 ABCB7O75027 752 aa19.44■□□□□ 0.7
RFC3P1-201ENST00000454568 MYCNP04198 464 aaPredicted RBP19.33■□□□□ 0.68
RFC3P1-201ENST00000454568 POTEHQ6S545 545 aa19.33■□□□□ 0.68
RFC3P1-201ENST00000454568 RBM42Q9BTD8 480 aaKnown RBP19.14■□□□□ 0.65
RFC3P1-201ENST00000454568 SLC4A1APQ9BWU0 796 aaKnown RBP19.12■□□□□ 0.65
RFC3P1-201ENST00000454568 POLA2Q14181 598 aa19.05■□□□□ 0.64
RFC3P1-201ENST00000454568 FOXD4L1Q9NU39 408 aa19.02■□□□□ 0.64
RFC3P1-201ENST00000454568 ZBTB12Q9Y330 459 aaPredicted RBP18.82■□□□□ 0.6
RFC3P1-201ENST00000454568 ATF5Q9Y2D1 282 aaPredicted RBP18.7■□□□□ 0.58
RFC3P1-201ENST00000454568 CCDC180Q9P1Z9 1646 aa18.68■□□□□ 0.58
RFC3P1-201ENST00000454568 CHRDL2Q6WN34 429 aa18.67■□□□□ 0.58
RFC3P1-201ENST00000454568 ABCC9O60706 1549 aa18.6■□□□□ 0.57
RFC3P1-201ENST00000454568 AKT1S1Q96B36 256 aa18.6■□□□□ 0.57
RFC3P1-201ENST00000454568 ATXN8OSP0DMR3 200 aa18.52■□□□□ 0.56
RFC3P1-201ENST00000454568 ZBTB22O15209 634 aa18.49■□□□□ 0.55
RFC3P1-201ENST00000454568 OSCARQ8IYS5 282 aa18.42■□□□□ 0.54
RFC3P1-201ENST00000454568 REM2Q8IYK8 340 aaPredicted RBP18.35■□□□□ 0.53
RFC3P1-201ENST00000454568 FBLN2P98095 1184 aa18.23■□□□□ 0.51
RFC3P1-201ENST00000454568 SPDYE2BA6NHP3 402 aa18.14■□□□□ 0.49
RFC3P1-201ENST00000454568 SPDYE6P0CI01 402 aa18.14■□□□□ 0.49
RFC3P1-201ENST00000454568 SPDYE2Q495Y8 402 aa18.14■□□□□ 0.49
RFC3P1-201ENST00000454568 PIP4P2Q8N4L2 257 aa18.14■□□□□ 0.49
RFC3P1-201ENST00000454568 PITPNM1O00562 1244 aa18.13■□□□□ 0.49
RFC3P1-201ENST00000454568 SP7Q8TDD2 431 aaPredicted RBP18.06■□□□□ 0.48
RFC3P1-201ENST00000454568 FXR2P51116 673 aaKnown RBP eCLIP18.03■□□□□ 0.48
RFC3P1-201ENST00000454568 HAX1O00165 279 aa17.92■□□□□ 0.46
RFC3P1-201ENST00000454568 SPDYE1Q8NFV5 336 aaPredicted RBP17.88■□□□□ 0.45
RFC3P1-201ENST00000454568 MKRN4PQ13434 485 aaPredicted RBP17.87■□□□□ 0.45
RFC3P1-201ENST00000454568 ZNF692Q9BU19 519 aaPredicted RBP17.86■□□□□ 0.45
RFC3P1-201ENST00000454568 SSUH2Q9Y2M2 353 aa17.81■□□□□ 0.44
RFC3P1-201ENST00000454568 CLEC11AQ9Y240 323 aa17.79■□□□□ 0.44
RFC3P1-201ENST00000454568 DCAF8L2P0C7V8 631 aa17.77■□□□□ 0.44
RFC3P1-201ENST00000454568 RB1CC1Q8TDY2 1594 aa17.74■□□□□ 0.43
RFC3P1-201ENST00000454568 PRKAR2AP13861 404 aaKnown RBP17.7■□□□□ 0.42
RFC3P1-201ENST00000454568 NACADO15069 1562 aa17.64■□□□□ 0.41
RFC3P1-201ENST00000454568 PABPN1Q86U42 306 aaKnown RBP eCLIP17.55■□□□□ 0.4
RFC3P1-201ENST00000454568 CSRNP3Q8WYN3 585 aa17.54■□□□□ 0.4
RFC3P1-201ENST00000454568 PRR29P0C7W0 189 aa17.51■□□□□ 0.39
RFC3P1-201ENST00000454568 EVX2Q03828 476 aa17.51■□□□□ 0.39
RFC3P1-201ENST00000454568 C19orf67A6NJJ6 358 aa17.46■□□□□ 0.39
RFC3P1-201ENST00000454568 MYO15BQ96JP2 1530 aa17.4■□□□□ 0.38
RFC3P1-201ENST00000454568 CHADLQ6NUI6 762 aa17.37■□□□□ 0.37
RFC3P1-201ENST00000454568 ZCCHC6Q5VYS8 1495 aaKnown RBP17.33■□□□□ 0.37
RFC3P1-201ENST00000454568 UNC13AQ9UPW8 1703 aa17.32■□□□□ 0.36
RFC3P1-201ENST00000454568 EHMT2Q96KQ7 1210 aa17.24■□□□□ 0.35
RFC3P1-201ENST00000454568 DCAF1Q9Y4B6 1507 aa17.24■□□□□ 0.35
RFC3P1-201ENST00000454568 GABBR2O75899 941 aa17.23■□□□□ 0.35
RFC3P1-201ENST00000454568 FARP1Q9Y4F1 1045 aaPredicted RBP17.19■□□□□ 0.34
RFC3P1-201ENST00000454568 STAG3Q9UJ98 1225 aa17.18■□□□□ 0.34
RFC3P1-201ENST00000454568 BICRAQ9NZM4 1560 aa17.16■□□□□ 0.34
RFC3P1-201ENST00000454568 CD44P16070 742 aaKnown RBP17.14■□□□□ 0.33
RFC3P1-201ENST00000454568 CLCN6P51797 869 aa17.14■□□□□ 0.33
RFC3P1-201ENST00000454568 SCRIBQ14160 1630 aa17.07■□□□□ 0.32
RFC3P1-201ENST00000454568 SPDYE4A6NLX3 237 aa17.05■□□□□ 0.32
RFC3P1-201ENST00000454568 SHROOM4Q9ULL8 1493 aa16.94■□□□□ 0.3
RFC3P1-201ENST00000454568 CREBZFQ9NS37 354 aa16.94■□□□□ 0.3
RFC3P1-201ENST00000454568 LHX8Q68G74 356 aa16.93■□□□□ 0.3
RFC3P1-201ENST00000454568 ZNF579Q8NAF0 562 aaKnown RBP16.88■□□□□ 0.29
RFC3P1-201ENST00000454568 ZRANB1Q9UGI0 708 aa16.87■□□□□ 0.29
RFC3P1-201ENST00000454568 PAK3O75914 559 aaPredicted RBP16.83■□□□□ 0.28
RFC3P1-201ENST00000454568 DCBLD2Q96PD2 775 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms