Protein–RNA interactions for Protein: Q9NUL5

RYDEN, Repressor of yield of DENV protein, humanhuman

Known RBP Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RYDENQ9NUL5 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.73■□□□□ 0.59
RYDENQ9NUL5 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.73■□□□□ 0.59
RYDENQ9NUL5 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RYDENQ9NUL5 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RYDENQ9NUL5 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RYDENQ9NUL5 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RYDENQ9NUL5 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.73■□□□□ 0.59
RYDENQ9NUL5 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RYDENQ9NUL5 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RYDENQ9NUL5 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RYDENQ9NUL5 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.73■□□□□ 0.59
RYDENQ9NUL5 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RYDENQ9NUL5 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RYDENQ9NUL5 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.73■□□□□ 0.59
RYDENQ9NUL5 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RYDENQ9NUL5 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RYDENQ9NUL5 AL024507.2-201ENST00000606070 2574 ntBASIC18.72■□□□□ 0.59
RYDENQ9NUL5 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RYDENQ9NUL5 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RYDENQ9NUL5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RYDENQ9NUL5 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.72■□□□□ 0.59
RYDENQ9NUL5 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.72■□□□□ 0.59
RYDENQ9NUL5 AC023632.3-201ENST00000521633 145 ntBASIC18.72■□□□□ 0.59
RYDENQ9NUL5 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RYDENQ9NUL5 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RYDENQ9NUL5 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RYDENQ9NUL5 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RYDENQ9NUL5 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RYDENQ9NUL5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RYDENQ9NUL5 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RYDENQ9NUL5 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RYDENQ9NUL5 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
RYDENQ9NUL5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.71■□□□□ 0.59
RYDENQ9NUL5 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RYDENQ9NUL5 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RYDENQ9NUL5 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RYDENQ9NUL5 AL355472.2-201ENST00000422958 438 ntBASIC18.71■□□□□ 0.59
RYDENQ9NUL5 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC18.71■□□□□ 0.59
RYDENQ9NUL5 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.71■□□□□ 0.59
RYDENQ9NUL5 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.71■□□□□ 0.59
RYDENQ9NUL5 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.71■□□□□ 0.59
RYDENQ9NUL5 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RYDENQ9NUL5 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.71■□□□□ 0.59
RYDENQ9NUL5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RYDENQ9NUL5 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RYDENQ9NUL5 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RYDENQ9NUL5 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.71■□□□□ 0.59
RYDENQ9NUL5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RYDENQ9NUL5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RYDENQ9NUL5 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.71■□□□□ 0.59
RYDENQ9NUL5 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
RYDENQ9NUL5 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RYDENQ9NUL5 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RYDENQ9NUL5 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.71■□□□□ 0.59
RYDENQ9NUL5 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.7■□□□□ 0.58
RYDENQ9NUL5 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RYDENQ9NUL5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RYDENQ9NUL5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.7■□□□□ 0.58
RYDENQ9NUL5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RYDENQ9NUL5 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RYDENQ9NUL5 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.7■□□□□ 0.58
RYDENQ9NUL5 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RYDENQ9NUL5 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
RYDENQ9NUL5 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RYDENQ9NUL5 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RYDENQ9NUL5 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RYDENQ9NUL5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RYDENQ9NUL5 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.7■□□□□ 0.58
RYDENQ9NUL5 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.7■□□□□ 0.58
RYDENQ9NUL5 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.7■□□□□ 0.58
RYDENQ9NUL5 MIR3908-201ENST00000579798 126 ntBASIC18.7■□□□□ 0.58
RYDENQ9NUL5 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.7■□□□□ 0.58
RYDENQ9NUL5 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.7■□□□□ 0.58
RYDENQ9NUL5 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC18.7■□□□□ 0.58
RYDENQ9NUL5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RYDENQ9NUL5 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RYDENQ9NUL5 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RYDENQ9NUL5 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.7■□□□□ 0.58
RYDENQ9NUL5 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RYDENQ9NUL5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RYDENQ9NUL5 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RYDENQ9NUL5 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RYDENQ9NUL5 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.69■□□□□ 0.58
RYDENQ9NUL5 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RYDENQ9NUL5 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.69■□□□□ 0.58
RYDENQ9NUL5 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.69■□□□□ 0.58
RYDENQ9NUL5 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RYDENQ9NUL5 CD99P1-205ENST00000527459 561 ntBASIC18.69■□□□□ 0.58
RYDENQ9NUL5 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.69■□□□□ 0.58
RYDENQ9NUL5 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.69■□□□□ 0.58
RYDENQ9NUL5 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.69■□□□□ 0.58
RYDENQ9NUL5 AC083880.1-201ENST00000608266 535 ntBASIC18.69■□□□□ 0.58
RYDENQ9NUL5 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RYDENQ9NUL5 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RYDENQ9NUL5 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RYDENQ9NUL5 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RYDENQ9NUL5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RYDENQ9NUL5 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.69■□□□□ 0.58
RYDENQ9NUL5 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RYDENQ9NUL5 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms