Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TLR9Q9NR96 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
TLR9Q9NR96 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TLR9Q9NR96 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TLR9Q9NR96 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
TLR9Q9NR96 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
TLR9Q9NR96 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TLR9Q9NR96 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
TLR9Q9NR96 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.81■■□□□ 1.08
TLR9Q9NR96 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
TLR9Q9NR96 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.81■■□□□ 1.08
TLR9Q9NR96 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TLR9Q9NR96 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TLR9Q9NR96 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
TLR9Q9NR96 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TLR9Q9NR96 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TLR9Q9NR96 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
TLR9Q9NR96 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.81■■□□□ 1.08
TLR9Q9NR96 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.81■■□□□ 1.08
TLR9Q9NR96 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.81■■□□□ 1.08
TLR9Q9NR96 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.81■■□□□ 1.08
TLR9Q9NR96 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.81■■□□□ 1.08
TLR9Q9NR96 AC110285.5-201ENST00000611501 352 ntBASIC21.81■■□□□ 1.08
TLR9Q9NR96 AC006557.6-201ENST00000623071 864 ntBASIC21.81■■□□□ 1.08
TLR9Q9NR96 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.81■■□□□ 1.08
TLR9Q9NR96 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TLR9Q9NR96 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TLR9Q9NR96 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.81■■□□□ 1.08
TLR9Q9NR96 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
TLR9Q9NR96 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.81■■□□□ 1.08
TLR9Q9NR96 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TLR9Q9NR96 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TLR9Q9NR96 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
TLR9Q9NR96 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TLR9Q9NR96 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
TLR9Q9NR96 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.8■■□□□ 1.08
TLR9Q9NR96 MIR4785-201ENST00000585005 73 ntBASIC21.8■■□□□ 1.08
TLR9Q9NR96 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
TLR9Q9NR96 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
TLR9Q9NR96 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TLR9Q9NR96 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TLR9Q9NR96 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TLR9Q9NR96 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
TLR9Q9NR96 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TLR9Q9NR96 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TLR9Q9NR96 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TLR9Q9NR96 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.79■■□□□ 1.08
TLR9Q9NR96 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TLR9Q9NR96 KRASP1-201ENST00000407852 552 ntBASIC21.79■■□□□ 1.08
TLR9Q9NR96 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TLR9Q9NR96 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TLR9Q9NR96 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.79■■□□□ 1.08
TLR9Q9NR96 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
TLR9Q9NR96 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.79■■□□□ 1.08
TLR9Q9NR96 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.79■■□□□ 1.08
TLR9Q9NR96 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TLR9Q9NR96 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TLR9Q9NR96 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
TLR9Q9NR96 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TLR9Q9NR96 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
TLR9Q9NR96 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TLR9Q9NR96 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TLR9Q9NR96 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TLR9Q9NR96 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
TLR9Q9NR96 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TLR9Q9NR96 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.78■■□□□ 1.08
TLR9Q9NR96 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.78■■□□□ 1.08
TLR9Q9NR96 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
TLR9Q9NR96 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TLR9Q9NR96 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TLR9Q9NR96 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.78■■□□□ 1.08
TLR9Q9NR96 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.78■■□□□ 1.08
TLR9Q9NR96 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TLR9Q9NR96 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.78■■□□□ 1.08
TLR9Q9NR96 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TLR9Q9NR96 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TLR9Q9NR96 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TLR9Q9NR96 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TLR9Q9NR96 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.78■■□□□ 1.08
TLR9Q9NR96 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TLR9Q9NR96 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
TLR9Q9NR96 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TLR9Q9NR96 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TLR9Q9NR96 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TLR9Q9NR96 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TLR9Q9NR96 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
TLR9Q9NR96 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
TLR9Q9NR96 AL390719.1-204ENST00000412397 1219 ntBASIC21.77■■□□□ 1.08
TLR9Q9NR96 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.77■■□□□ 1.08
TLR9Q9NR96 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TLR9Q9NR96 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.77■■□□□ 1.08
TLR9Q9NR96 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
TLR9Q9NR96 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.77■■□□□ 1.08
TLR9Q9NR96 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.77■■□□□ 1.07
TLR9Q9NR96 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
TLR9Q9NR96 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.77■■□□□ 1.07
TLR9Q9NR96 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TLR9Q9NR96 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.76■■□□□ 1.07
TLR9Q9NR96 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.76■■□□□ 1.07
TLR9Q9NR96 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms