Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK4Q9HAZ1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CLK4Q9HAZ1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK4Q9HAZ1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK4Q9HAZ1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK4Q9HAZ1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CLK4Q9HAZ1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLK4Q9HAZ1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLK4Q9HAZ1 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLK4Q9HAZ1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
CLK4Q9HAZ1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.83■□□□□ 0.77
CLK4Q9HAZ1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLK4Q9HAZ1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.83■□□□□ 0.77
CLK4Q9HAZ1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.83■□□□□ 0.77
CLK4Q9HAZ1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.83■□□□□ 0.77
CLK4Q9HAZ1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CLK4Q9HAZ1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.83■□□□□ 0.77
CLK4Q9HAZ1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.83■□□□□ 0.77
CLK4Q9HAZ1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.83■□□□□ 0.76
CLK4Q9HAZ1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLK4Q9HAZ1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLK4Q9HAZ1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLK4Q9HAZ1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLK4Q9HAZ1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLK4Q9HAZ1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.83■□□□□ 0.76
CLK4Q9HAZ1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLK4Q9HAZ1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLK4Q9HAZ1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CLK4Q9HAZ1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLK4Q9HAZ1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLK4Q9HAZ1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
CLK4Q9HAZ1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLK4Q9HAZ1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLK4Q9HAZ1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLK4Q9HAZ1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CLK4Q9HAZ1 UBE2DNL-204ENST00000602536 740 ntBASIC19.82■□□□□ 0.76
CLK4Q9HAZ1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.82■□□□□ 0.76
CLK4Q9HAZ1 AC243732.1-201ENST00000612648 864 ntBASIC19.82■□□□□ 0.76
CLK4Q9HAZ1 AC092666.2-201ENST00000613287 246 ntBASIC19.82■□□□□ 0.76
CLK4Q9HAZ1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.82■□□□□ 0.76
CLK4Q9HAZ1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CLK4Q9HAZ1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CLK4Q9HAZ1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLK4Q9HAZ1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLK4Q9HAZ1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.82■□□□□ 0.76
CLK4Q9HAZ1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLK4Q9HAZ1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 BID-214ENST00000617586 542 ntTSL 5 BASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 AC092437.1-201ENST00000624794 1048 ntBASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 AC061975.6-201ENST00000579045 1553 ntBASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLK4Q9HAZ1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CLK4Q9HAZ1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLK4Q9HAZ1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.8■□□□□ 0.76
CLK4Q9HAZ1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLK4Q9HAZ1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLK4Q9HAZ1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.8■□□□□ 0.76
CLK4Q9HAZ1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLK4Q9HAZ1 SLC7A5P2-201ENST00000553010 536 ntBASIC19.8■□□□□ 0.76
CLK4Q9HAZ1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.8■□□□□ 0.76
CLK4Q9HAZ1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.8■□□□□ 0.76
CLK4Q9HAZ1 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.8■□□□□ 0.76
CLK4Q9HAZ1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.8■□□□□ 0.76
CLK4Q9HAZ1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.8■□□□□ 0.76
CLK4Q9HAZ1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.8■□□□□ 0.76
CLK4Q9HAZ1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLK4Q9HAZ1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CLK4Q9HAZ1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLK4Q9HAZ1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.8■□□□□ 0.76
CLK4Q9HAZ1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.79■□□□□ 0.76
CLK4Q9HAZ1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLK4Q9HAZ1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLK4Q9HAZ1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms