Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AC098590.1-201ENST00000468126 897 ntBASIC21.28■■□□□ 1
RNF38Q9H0F5 C2orf69P4-201ENST00000565394 541 ntBASIC21.28■■□□□ 1
RNF38Q9H0F5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.28■■□□□ 1
RNF38Q9H0F5 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF38Q9H0F5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.28■■□□□ 1
RNF38Q9H0F5 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF38Q9H0F5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF38Q9H0F5 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF38Q9H0F5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.28■■□□□ 1
RNF38Q9H0F5 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RNF38Q9H0F5 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.28■■□□□ 1
RNF38Q9H0F5 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF38Q9H0F5 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.27■■□□□ 1
RNF38Q9H0F5 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.27■■□□□ 1
RNF38Q9H0F5 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.27■■□□□ 1
RNF38Q9H0F5 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.27■■□□□ 1
RNF38Q9H0F5 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RNF38Q9H0F5 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
RNF38Q9H0F5 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF38Q9H0F5 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.27■■□□□ 1
RNF38Q9H0F5 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.27■■□□□ 1
RNF38Q9H0F5 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.27■■□□□ 1
RNF38Q9H0F5 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.27■□□□□ 0.99
RNF38Q9H0F5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.27■□□□□ 0.99
RNF38Q9H0F5 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RNF38Q9H0F5 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF38Q9H0F5 AL049796.1-201ENST00000565336 1766 ntBASIC21.26■□□□□ 0.99
RNF38Q9H0F5 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
RNF38Q9H0F5 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RNF38Q9H0F5 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF38Q9H0F5 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
RNF38Q9H0F5 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF38Q9H0F5 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.26■□□□□ 0.99
RNF38Q9H0F5 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RNF38Q9H0F5 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.26■□□□□ 0.99
RNF38Q9H0F5 AL356652.1-201ENST00000615962 565 ntBASIC21.26■□□□□ 0.99
RNF38Q9H0F5 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RNF38Q9H0F5 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.26■□□□□ 0.99
RNF38Q9H0F5 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RNF38Q9H0F5 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF38Q9H0F5 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RNF38Q9H0F5 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF38Q9H0F5 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.25■□□□□ 0.99
RNF38Q9H0F5 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
RNF38Q9H0F5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF38Q9H0F5 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF38Q9H0F5 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF38Q9H0F5 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
RNF38Q9H0F5 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.25■□□□□ 0.99
RNF38Q9H0F5 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.25■□□□□ 0.99
RNF38Q9H0F5 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
RNF38Q9H0F5 RPS2P52-201ENST00000469610 820 ntBASIC21.25■□□□□ 0.99
RNF38Q9H0F5 UNC93B4-201ENST00000505679 747 ntBASIC21.25■□□□□ 0.99
RNF38Q9H0F5 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.25■□□□□ 0.99
RNF38Q9H0F5 LINC00565-201ENST00000562710 2331 ntBASIC21.25■□□□□ 0.99
RNF38Q9H0F5 AC073648.6-201ENST00000641589 218 ntBASIC21.25■□□□□ 0.99
RNF38Q9H0F5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF38Q9H0F5 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
RNF38Q9H0F5 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF38Q9H0F5 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF38Q9H0F5 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.24■□□□□ 0.99
RNF38Q9H0F5 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF38Q9H0F5 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RNF38Q9H0F5 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF38Q9H0F5 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.24■□□□□ 0.99
RNF38Q9H0F5 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF38Q9H0F5 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RNF38Q9H0F5 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.24■□□□□ 0.99
RNF38Q9H0F5 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF38Q9H0F5 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.24■□□□□ 0.99
RNF38Q9H0F5 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF38Q9H0F5 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF38Q9H0F5 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF38Q9H0F5 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF38Q9H0F5 FEM1AP4-201ENST00000443167 1987 ntBASIC21.24■□□□□ 0.99
RNF38Q9H0F5 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF38Q9H0F5 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF38Q9H0F5 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
RNF38Q9H0F5 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF38Q9H0F5 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF38Q9H0F5 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF38Q9H0F5 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF38Q9H0F5 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF38Q9H0F5 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF38Q9H0F5 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF38Q9H0F5 PGM5P4-201ENST00000421970 445 ntBASIC21.23■□□□□ 0.99
RNF38Q9H0F5 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.23■□□□□ 0.99
RNF38Q9H0F5 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF38Q9H0F5 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF38Q9H0F5 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF38Q9H0F5 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF38Q9H0F5 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF38Q9H0F5 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF38Q9H0F5 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF38Q9H0F5 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
RNF38Q9H0F5 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF38Q9H0F5 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF38Q9H0F5 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF38Q9H0F5 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF38Q9H0F5 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms