Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.46■□□□□ 0.87
CPNE1Q99829 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE1Q99829 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.45■□□□□ 0.87
CPNE1Q99829 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE1Q99829 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CPNE1Q99829 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE1Q99829 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE1Q99829 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.45■□□□□ 0.86
CPNE1Q99829 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.45■□□□□ 0.86
CPNE1Q99829 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.45■□□□□ 0.86
CPNE1Q99829 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE1Q99829 AC123595.1-201ENST00000440769 1046 ntBASIC20.45■□□□□ 0.86
CPNE1Q99829 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.45■□□□□ 0.86
CPNE1Q99829 CCDC92B-201ENST00000575506 885 ntBASIC20.45■□□□□ 0.86
CPNE1Q99829 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE1Q99829 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE1Q99829 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE1Q99829 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CPNE1Q99829 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE1Q99829 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.44■□□□□ 0.86
CPNE1Q99829 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPNE1Q99829 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.44■□□□□ 0.86
CPNE1Q99829 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CPNE1Q99829 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.44■□□□□ 0.86
CPNE1Q99829 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.44■□□□□ 0.86
CPNE1Q99829 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CPNE1Q99829 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.44■□□□□ 0.86
CPNE1Q99829 KRT18P20-201ENST00000548986 1279 ntBASIC20.44■□□□□ 0.86
CPNE1Q99829 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.44■□□□□ 0.86
CPNE1Q99829 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.44■□□□□ 0.86
CPNE1Q99829 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPNE1Q99829 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CPNE1Q99829 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPNE1Q99829 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CPNE1Q99829 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.44■□□□□ 0.86
CPNE1Q99829 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPNE1Q99829 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.44■□□□□ 0.86
CPNE1Q99829 AFG3L1P-217ENST00000557444 2447 ntBASIC20.44■□□□□ 0.86
CPNE1Q99829 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPNE1Q99829 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPNE1Q99829 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CPNE1Q99829 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CPNE1Q99829 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE1Q99829 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE1Q99829 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.43■□□□□ 0.86
CPNE1Q99829 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CPNE1Q99829 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CPNE1Q99829 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CPNE1Q99829 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE1Q99829 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.43■□□□□ 0.86
CPNE1Q99829 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CPNE1Q99829 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPNE1Q99829 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.42■□□□□ 0.86
CPNE1Q99829 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CPNE1Q99829 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPNE1Q99829 TERF1P2-201ENST00000583350 1212 ntBASIC20.42■□□□□ 0.86
CPNE1Q99829 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.42■□□□□ 0.86
CPNE1Q99829 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CPNE1Q99829 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.42■□□□□ 0.86
CPNE1Q99829 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPNE1Q99829 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPNE1Q99829 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE1Q99829 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE1Q99829 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE1Q99829 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE1Q99829 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CPNE1Q99829 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE1Q99829 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.41■□□□□ 0.86
CPNE1Q99829 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.41■□□□□ 0.86
CPNE1Q99829 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.41■□□□□ 0.86
CPNE1Q99829 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.41■□□□□ 0.86
CPNE1Q99829 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.41■□□□□ 0.86
CPNE1Q99829 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.41■□□□□ 0.86
CPNE1Q99829 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE1Q99829 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE1Q99829 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE1Q99829 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE1Q99829 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CPNE1Q99829 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE1Q99829 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.41■□□□□ 0.86
CPNE1Q99829 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CPNE1Q99829 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE1Q99829 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CPNE1Q99829 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE1Q99829 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.4■□□□□ 0.86
CPNE1Q99829 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.4■□□□□ 0.86
CPNE1Q99829 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CPNE1Q99829 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE1Q99829 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
CPNE1Q99829 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CPNE1Q99829 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.4■□□□□ 0.86
CPNE1Q99829 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.4■□□□□ 0.86
CPNE1Q99829 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.4■□□□□ 0.86
CPNE1Q99829 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE1Q99829 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.4■□□□□ 0.86
CPNE1Q99829 AC243732.1-201ENST00000612648 864 ntBASIC20.4■□□□□ 0.86
CPNE1Q99829 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
CPNE1Q99829 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.4■□□□□ 0.86
CPNE1Q99829 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE1Q99829 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms