Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
S1PR3Q99500 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
S1PR3Q99500 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.85■□□□□ 0.29
S1PR3Q99500 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.85■□□□□ 0.29
S1PR3Q99500 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.85■□□□□ 0.29
S1PR3Q99500 NTF6G-201ENST00000591094 616 ntBASIC16.85■□□□□ 0.29
S1PR3Q99500 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
S1PR3Q99500 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.85■□□□□ 0.29
S1PR3Q99500 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
S1PR3Q99500 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
S1PR3Q99500 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
S1PR3Q99500 AC004854.2-201ENST00000608450 1441 ntBASIC16.85■□□□□ 0.29
S1PR3Q99500 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
S1PR3Q99500 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.85■□□□□ 0.29
S1PR3Q99500 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
S1PR3Q99500 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
S1PR3Q99500 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
S1PR3Q99500 AC007225.1-201ENST00000566331 1836 ntBASIC16.84■□□□□ 0.29
S1PR3Q99500 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
S1PR3Q99500 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
S1PR3Q99500 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
S1PR3Q99500 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
S1PR3Q99500 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
S1PR3Q99500 KRT19P1-201ENST00000405746 1186 ntBASIC16.84■□□□□ 0.29
S1PR3Q99500 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
S1PR3Q99500 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.84■□□□□ 0.29
S1PR3Q99500 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.84■□□□□ 0.29
S1PR3Q99500 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.84■□□□□ 0.29
S1PR3Q99500 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.84■□□□□ 0.29
S1PR3Q99500 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
S1PR3Q99500 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.84■□□□□ 0.29
S1PR3Q99500 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.84■□□□□ 0.29
S1PR3Q99500 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
S1PR3Q99500 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
S1PR3Q99500 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
S1PR3Q99500 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
S1PR3Q99500 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
S1PR3Q99500 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
S1PR3Q99500 AP005212.1-201ENST00000581547 1997 ntBASIC16.84■□□□□ 0.29
S1PR3Q99500 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.84■□□□□ 0.29
S1PR3Q99500 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
S1PR3Q99500 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
S1PR3Q99500 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
S1PR3Q99500 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.84■□□□□ 0.29
S1PR3Q99500 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
S1PR3Q99500 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
S1PR3Q99500 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
S1PR3Q99500 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
S1PR3Q99500 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
S1PR3Q99500 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.83■□□□□ 0.28
S1PR3Q99500 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
S1PR3Q99500 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
S1PR3Q99500 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
S1PR3Q99500 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.83■□□□□ 0.28
S1PR3Q99500 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
S1PR3Q99500 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.83■□□□□ 0.28
S1PR3Q99500 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.83■□□□□ 0.28
S1PR3Q99500 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
S1PR3Q99500 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
S1PR3Q99500 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
S1PR3Q99500 AC073314.1-201ENST00000568729 2216 ntBASIC16.82■□□□□ 0.28
S1PR3Q99500 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
S1PR3Q99500 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
S1PR3Q99500 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
S1PR3Q99500 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.82■□□□□ 0.28
S1PR3Q99500 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
S1PR3Q99500 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
S1PR3Q99500 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
S1PR3Q99500 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
S1PR3Q99500 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
S1PR3Q99500 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
S1PR3Q99500 AC092667.1-201ENST00000434301 2586 ntBASIC16.82■□□□□ 0.28
S1PR3Q99500 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
S1PR3Q99500 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
S1PR3Q99500 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.82■□□□□ 0.28
S1PR3Q99500 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
S1PR3Q99500 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.82■□□□□ 0.28
S1PR3Q99500 RARRES2P11-201ENST00000635158 484 ntBASIC16.82■□□□□ 0.28
S1PR3Q99500 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
S1PR3Q99500 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
S1PR3Q99500 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
S1PR3Q99500 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
S1PR3Q99500 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
S1PR3Q99500 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.82■□□□□ 0.28
S1PR3Q99500 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
S1PR3Q99500 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
S1PR3Q99500 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
S1PR3Q99500 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
S1PR3Q99500 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
S1PR3Q99500 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
S1PR3Q99500 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.82■□□□□ 0.28
S1PR3Q99500 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
S1PR3Q99500 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
S1PR3Q99500 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.81■□□□□ 0.28
S1PR3Q99500 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
S1PR3Q99500 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
S1PR3Q99500 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
S1PR3Q99500 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
S1PR3Q99500 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.81■□□□□ 0.28
S1PR3Q99500 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms