Protein–RNA interactions for Protein: Q99325

ATG40, Autophagy-related protein 40, yeastyeast

Predictions only

Length 256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG40Q99325 POL5YEL055C 3069 nt1.39□□□□□ -2.19
ATG40Q99325 YJL070CYJL070C 2667 nt1.39□□□□□ -2.19
ATG40Q99325 YHR052W-AYHR052W-A 195 nt1.38□□□□□ -2.19
ATG40Q99325 YHR054W-AYHR054W-A 195 nt1.38□□□□□ -2.19
ATG40Q99325 SUS1YBR111W-A 291 nt1.38□□□□□ -2.19
ATG40Q99325 VPS38YLR360W 1320 nt1.38□□□□□ -2.19
ATG40Q99325 SPC110YDR356W 2835 nt1.37□□□□□ -2.19
ATG40Q99325 YDL157CYDL157C 357 nt1.37□□□□□ -2.19
ATG40Q99325 ATP17YDR377W 306 nt1.37□□□□□ -2.19
ATG40Q99325 RPL37BYDR500C 267 nt1.37□□□□□ -2.19
ATG40Q99325 HOP2YGL033W 657 nt1.37□□□□□ -2.19
ATG40Q99325 VMA7YGR020C 357 nt1.37□□□□□ -2.19
ATG40Q99325 YGR242WYGR242W 309 nt1.37□□□□□ -2.19
ATG40Q99325 YJL147CYJL147C 1149 nt1.37□□□□□ -2.19
ATG40Q99325 YAL064WYAL064W 285 nt1.37□□□□□ -2.19
ATG40Q99325 YLR053CYLR053C 327 nt1.37□□□□□ -2.19
ATG40Q99325 SMD3YLR147C 306 nt1.37□□□□□ -2.19
ATG40Q99325 ATG38YLR211C 681 nt1.37□□□□□ -2.19
ATG40Q99325 LSM2YBL026W 288 nt1.37□□□□□ -2.19
ATG40Q99325 LEU3YLR451W 2661 nt1.36□□□□□ -2.19
ATG40Q99325 ECM25YJL201W 1800 nt1.36□□□□□ -2.19
ATG40Q99325 CFT2YLR115W 2580 nt1.36□□□□□ -2.19
ATG40Q99325 CDC50YCR094W 1176 nt1.36□□□□□ -2.19
ATG40Q99325 IRC4YDR540C 540 nt1.36□□□□□ -2.19
ATG40Q99325 YIR020C-BYIR020C-B 735 nt1.36□□□□□ -2.19
ATG40Q99325 CCW14YLR390W-A 717 nt1.36□□□□□ -2.19
ATG40Q99325 RXT2YBR095C 1293 nt1.36□□□□□ -2.19
ATG40Q99325 MNE1YOR350C 1992 nt1.36□□□□□ -2.19
ATG40Q99325 HER1YOR227W 3741 nt1.36□□□□□ -2.19
ATG40Q99325 CAT2YML042W 2013 nt1.35□□□□□ -2.19
ATG40Q99325 SLM1YIL105C 2061 nt1.35□□□□□ -2.19
ATG40Q99325 RKM1YPL208W 1752 nt1.35□□□□□ -2.19
ATG40Q99325 RSM28YDR494W 1086 nt1.35□□□□□ -2.19
ATG40Q99325 YER158W-AYER158W-A 216 nt1.35□□□□□ -2.19
ATG40Q99325 YFR057WYFR057W 456 nt1.35□□□□□ -2.19
ATG40Q99325 HYR1YIR037W 492 nt1.35□□□□□ -2.19
ATG40Q99325 SRP21YKL122C 504 nt1.35□□□□□ -2.19
ATG40Q99325 SYM1YLR251W 594 nt1.35□□□□□ -2.19
ATG40Q99325 SPC2YML055W 537 nt1.35□□□□□ -2.19
ATG40Q99325 GIM5YML094W 492 nt1.35□□□□□ -2.19
ATG40Q99325 TOA1YOR194C 861 nt1.35□□□□□ -2.19
ATG40Q99325 YPL034WYPL034W 498 nt1.35□□□□□ -2.19
ATG40Q99325 ATG11YPR049C 3537 nt1.35□□□□□ -2.19
ATG40Q99325 YDR341CYDR341C 1824 nt1.35□□□□□ -2.19
ATG40Q99325 BFA1YJR053W 1725 nt1.35□□□□□ -2.19
ATG40Q99325 PTC5YOR090C 1719 nt1.35□□□□□ -2.19
ATG40Q99325 VMR1YHL035C 4779 nt1.34□□□□□ -2.19
ATG40Q99325 HSH155YMR288W 2916 nt1.34□□□□□ -2.19
ATG40Q99325 15S_rRNA15S_rRNA 1649 nt1.34□□□□□ -2.19
ATG40Q99325 YBP1YBR216C 2025 nt1.34□□□□□ -2.19
ATG40Q99325 CAJ1YER048C 1176 nt1.34□□□□□ -2.19
ATG40Q99325 LOC1YFR001W 615 nt1.34□□□□□ -2.19
ATG40Q99325 NOP10YHR072W-A 177 nt1.34□□□□□ -2.19
ATG40Q99325 RAM2YKL019W 951 nt1.34□□□□□ -2.19
ATG40Q99325 YET1YKL065C 621 nt1.34□□□□□ -2.19
ATG40Q99325 COA6YMR244C-A 315 nt1.34□□□□□ -2.19
ATG40Q99325 LSM7YNL147W 348 nt1.34□□□□□ -2.19
ATG40Q99325 NAN1YPL126W 2691 nt1.34□□□□□ -2.2
ATG40Q99325 KAR9YPL269W 1935 nt1.34□□□□□ -2.2
ATG40Q99325 SAG1YJR004C 1953 nt1.34□□□□□ -2.2
ATG40Q99325 SYH1YPL105C 2550 nt1.33□□□□□ -2.2
ATG40Q99325 MON2YNL297C 4911 nt1.33□□□□□ -2.2
ATG40Q99325 AHC2YCR082W 387 nt1.33□□□□□ -2.2
ATG40Q99325 YDL025W-AYDL025W-A 105 nt1.33□□□□□ -2.2
ATG40Q99325 YDR248CYDR248C 582 nt1.33□□□□□ -2.2
ATG40Q99325 RPA34YJL148W 702 nt1.33□□□□□ -2.2
ATG40Q99325 YJR023CYJR023C 402 nt1.33□□□□□ -2.2
ATG40Q99325 VPS63YLR261C 327 nt1.33□□□□□ -2.2
ATG40Q99325 MRPL44YMR225C 297 nt1.33□□□□□ -2.2
ATG40Q99325 RIO2YNL207W 1278 nt1.33□□□□□ -2.2
ATG40Q99325 YOL159C-AYOL159C-A 273 nt1.33□□□□□ -2.2
ATG40Q99325 YPL119C-AYPL119C-A 264 nt1.33□□□□□ -2.2
ATG40Q99325 RPB5YBR154C 648 nt1.33□□□□□ -2.2
ATG40Q99325 TRS20YBR254C 528 nt1.33□□□□□ -2.2
ATG40Q99325 ADF1YCL058W-A 342 nt1.33□□□□□ -2.2
ATG40Q99325 SIR4YDR227W 4077 nt1.33□□□□□ -2.2
ATG40Q99325 CDC53YDL132W 2448 nt1.32□□□□□ -2.2
ATG40Q99325 NCS2YNL119W 1482 nt1.32□□□□□ -2.2
ATG40Q99325 YGL014C-AYGL014C-A 162 nt1.32□□□□□ -2.2
ATG40Q99325 YHR050W-AYHR050W-A 171 nt1.32□□□□□ -2.2
ATG40Q99325 PDP3YLR455W 915 nt1.32□□□□□ -2.2
ATG40Q99325 YNL179CYNL179C 438 nt1.32□□□□□ -2.2
ATG40Q99325 YOL106WYOL106W 354 nt1.32□□□□□ -2.2
ATG40Q99325 SSK2YNR031C 4740 nt1.32□□□□□ -2.2
ATG40Q99325 NCL1YBL024W 2055 nt1.31□□□□□ -2.2
ATG40Q99325 TRM3YDL112W 4311 nt1.31□□□□□ -2.2
ATG40Q99325 CCH1YGR217W 6120 nt1.31□□□□□ -2.2
ATG40Q99325 YDR018CYDR018C 1191 nt1.31□□□□□ -2.2
ATG40Q99325 TSA2YDR453C 591 nt1.31□□□□□ -2.2
ATG40Q99325 YGL069CYGL069C 465 nt1.31□□□□□ -2.2
ATG40Q99325 YJL086CYJL086C 369 nt1.31□□□□□ -2.2
ATG40Q99325 YJL127C-BYJL127C-B 159 nt1.31□□□□□ -2.2
ATG40Q99325 HHT2YNL031C 411 nt1.31□□□□□ -2.2
ATG40Q99325 SAR1YPL218W 573 nt1.31□□□□□ -2.2
ATG40Q99325 YBR174CYBR174C 315 nt1.31□□□□□ -2.2
ATG40Q99325 HKR1YDR420W 5409 nt1.31□□□□□ -2.2
ATG40Q99325 SPO22YIL073C 2928 nt1.3□□□□□ -2.2
ATG40Q99325 HCS1YKL017C 2052 nt1.3□□□□□ -2.2
ATG40Q99325 NDD1YOR372C 1665 nt1.3□□□□□ -2.2
ATG40Q99325 YDL163WYDL163W 303 nt1.3□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 20.5 ms