Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC47A1Q96FL8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SLC47A1Q96FL8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC47A1Q96FL8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC47A1Q96FL8 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC47A1Q96FL8 SUDS3P1-201ENST00000505831 966 ntBASIC19.26■□□□□ 0.67
SLC47A1Q96FL8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC47A1Q96FL8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.26■□□□□ 0.67
SLC47A1Q96FL8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SLC47A1Q96FL8 AC055733.4-201ENST00000638462 1354 ntBASIC19.26■□□□□ 0.67
SLC47A1Q96FL8 AC005224.4-201ENST00000583262 1652 ntBASIC19.26■□□□□ 0.67
SLC47A1Q96FL8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC47A1Q96FL8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC47A1Q96FL8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC47A1Q96FL8 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC47A1Q96FL8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC47A1Q96FL8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC47A1Q96FL8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
SLC47A1Q96FL8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC47A1Q96FL8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SLC47A1Q96FL8 AC011484.1-201ENST00000377652 1995 ntBASIC19.25■□□□□ 0.67
SLC47A1Q96FL8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC47A1Q96FL8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SLC47A1Q96FL8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.25■□□□□ 0.67
SLC47A1Q96FL8 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC47A1Q96FL8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC47A1Q96FL8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC47A1Q96FL8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC47A1Q96FL8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC47A1Q96FL8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC47A1Q96FL8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC47A1Q96FL8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SLC47A1Q96FL8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC47A1Q96FL8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SLC47A1Q96FL8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC47A1Q96FL8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC47A1Q96FL8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC47A1Q96FL8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC47A1Q96FL8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC47A1Q96FL8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
SLC47A1Q96FL8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC47A1Q96FL8 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC47A1Q96FL8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SLC47A1Q96FL8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC47A1Q96FL8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SLC47A1Q96FL8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC47A1Q96FL8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC47A1Q96FL8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC47A1Q96FL8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SLC47A1Q96FL8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SLC47A1Q96FL8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC47A1Q96FL8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC47A1Q96FL8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SLC47A1Q96FL8 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC47A1Q96FL8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC47A1Q96FL8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC47A1Q96FL8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC47A1Q96FL8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC47A1Q96FL8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC47A1Q96FL8 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC47A1Q96FL8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SLC47A1Q96FL8 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC47A1Q96FL8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC47A1Q96FL8 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC47A1Q96FL8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.23■□□□□ 0.67
SLC47A1Q96FL8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC47A1Q96FL8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC47A1Q96FL8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC47A1Q96FL8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SLC47A1Q96FL8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC47A1Q96FL8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC47A1Q96FL8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC47A1Q96FL8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC47A1Q96FL8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC47A1Q96FL8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC47A1Q96FL8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC47A1Q96FL8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC47A1Q96FL8 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC47A1Q96FL8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC47A1Q96FL8 AC142381.2-201ENST00000566120 298 ntBASIC19.22■□□□□ 0.67
SLC47A1Q96FL8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC47A1Q96FL8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC47A1Q96FL8 AC087289.5-201ENST00000586076 3175 ntBASIC19.22■□□□□ 0.67
SLC47A1Q96FL8 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SLC47A1Q96FL8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SLC47A1Q96FL8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC47A1Q96FL8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC47A1Q96FL8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC47A1Q96FL8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SLC47A1Q96FL8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC47A1Q96FL8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC47A1Q96FL8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC47A1Q96FL8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC47A1Q96FL8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.22■□□□□ 0.67
SLC47A1Q96FL8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SLC47A1Q96FL8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC47A1Q96FL8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC47A1Q96FL8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC47A1Q96FL8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC47A1Q96FL8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms