Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF31Q96EP0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF31Q96EP0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RNF31Q96EP0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF31Q96EP0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF31Q96EP0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF31Q96EP0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RNF31Q96EP0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF31Q96EP0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF31Q96EP0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF31Q96EP0 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF31Q96EP0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.69■□□□□ 0.74
RNF31Q96EP0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RNF31Q96EP0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF31Q96EP0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.69■□□□□ 0.74
RNF31Q96EP0 ITM2C-210ENST00000620962 501 ntBASIC19.69■□□□□ 0.74
RNF31Q96EP0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF31Q96EP0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF31Q96EP0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF31Q96EP0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF31Q96EP0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.69■□□□□ 0.74
RNF31Q96EP0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF31Q96EP0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
RNF31Q96EP0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF31Q96EP0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF31Q96EP0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF31Q96EP0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
RNF31Q96EP0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF31Q96EP0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF31Q96EP0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF31Q96EP0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF31Q96EP0 AL158047.1-201ENST00000445918 881 ntBASIC19.68■□□□□ 0.74
RNF31Q96EP0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF31Q96EP0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.68■□□□□ 0.74
RNF31Q96EP0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
RNF31Q96EP0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF31Q96EP0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF31Q96EP0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF31Q96EP0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF31Q96EP0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RNF31Q96EP0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF31Q96EP0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RNF31Q96EP0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF31Q96EP0 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF31Q96EP0 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF31Q96EP0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF31Q96EP0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF31Q96EP0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RNF31Q96EP0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.67■□□□□ 0.74
RNF31Q96EP0 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF31Q96EP0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF31Q96EP0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF31Q96EP0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF31Q96EP0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF31Q96EP0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF31Q96EP0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF31Q96EP0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF31Q96EP0 FBXW4P1-201ENST00000426721 2239 ntBASIC19.67■□□□□ 0.74
RNF31Q96EP0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RNF31Q96EP0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF31Q96EP0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF31Q96EP0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF31Q96EP0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF31Q96EP0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RNF31Q96EP0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF31Q96EP0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF31Q96EP0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF31Q96EP0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF31Q96EP0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF31Q96EP0 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF31Q96EP0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF31Q96EP0 CDV3P1-201ENST00000471403 739 ntBASIC19.66■□□□□ 0.74
RNF31Q96EP0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF31Q96EP0 CYP2T3P-201ENST00000601990 817 ntBASIC19.66■□□□□ 0.74
RNF31Q96EP0 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF31Q96EP0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF31Q96EP0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF31Q96EP0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF31Q96EP0 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF31Q96EP0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF31Q96EP0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF31Q96EP0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF31Q96EP0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RNF31Q96EP0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RNF31Q96EP0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RNF31Q96EP0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF31Q96EP0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF31Q96EP0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF31Q96EP0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF31Q96EP0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF31Q96EP0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF31Q96EP0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF31Q96EP0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF31Q96EP0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RNF31Q96EP0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF31Q96EP0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.65■□□□□ 0.74
RNF31Q96EP0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RNF31Q96EP0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF31Q96EP0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF31Q96EP0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms