Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SH3KBP1Q96B97 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.22■□□□□ 0.83
SH3KBP1Q96B97 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SH3KBP1Q96B97 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.22■□□□□ 0.83
SH3KBP1Q96B97 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.22■□□□□ 0.83
SH3KBP1Q96B97 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.22■□□□□ 0.83
SH3KBP1Q96B97 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.22■□□□□ 0.83
SH3KBP1Q96B97 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SH3KBP1Q96B97 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SH3KBP1Q96B97 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SH3KBP1Q96B97 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SH3KBP1Q96B97 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH3KBP1Q96B97 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH3KBP1Q96B97 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH3KBP1Q96B97 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.21■□□□□ 0.83
SH3KBP1Q96B97 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
SH3KBP1Q96B97 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SH3KBP1Q96B97 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.21■□□□□ 0.83
SH3KBP1Q96B97 AC091799.1-201ENST00000422823 811 ntBASIC20.21■□□□□ 0.83
SH3KBP1Q96B97 AC093787.1-201ENST00000450396 207 ntBASIC20.21■□□□□ 0.83
SH3KBP1Q96B97 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.21■□□□□ 0.83
SH3KBP1Q96B97 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.21■□□□□ 0.83
SH3KBP1Q96B97 FAM21FP-204ENST00000608637 956 ntBASIC20.21■□□□□ 0.83
SH3KBP1Q96B97 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.21■□□□□ 0.83
SH3KBP1Q96B97 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.21■□□□□ 0.83
SH3KBP1Q96B97 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH3KBP1Q96B97 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.21■□□□□ 0.83
SH3KBP1Q96B97 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SH3KBP1Q96B97 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SH3KBP1Q96B97 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.21■□□□□ 0.83
SH3KBP1Q96B97 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH3KBP1Q96B97 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH3KBP1Q96B97 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH3KBP1Q96B97 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH3KBP1Q96B97 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH3KBP1Q96B97 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH3KBP1Q96B97 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH3KBP1Q96B97 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.2■□□□□ 0.82
SH3KBP1Q96B97 CD99P1-205ENST00000527459 561 ntBASIC20.2■□□□□ 0.82
SH3KBP1Q96B97 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.2■□□□□ 0.82
SH3KBP1Q96B97 AC092118.2-201ENST00000613495 667 ntBASIC20.2■□□□□ 0.82
SH3KBP1Q96B97 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.2■□□□□ 0.82
SH3KBP1Q96B97 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.2■□□□□ 0.82
SH3KBP1Q96B97 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.2■□□□□ 0.82
SH3KBP1Q96B97 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SH3KBP1Q96B97 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SH3KBP1Q96B97 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.2■□□□□ 0.82
SH3KBP1Q96B97 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.2■□□□□ 0.82
SH3KBP1Q96B97 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH3KBP1Q96B97 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SH3KBP1Q96B97 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH3KBP1Q96B97 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SH3KBP1Q96B97 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH3KBP1Q96B97 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.19■□□□□ 0.82
SH3KBP1Q96B97 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.19■□□□□ 0.82
SH3KBP1Q96B97 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SH3KBP1Q96B97 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
SH3KBP1Q96B97 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SH3KBP1Q96B97 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.19■□□□□ 0.82
SH3KBP1Q96B97 KRT18P6-201ENST00000555540 1265 ntBASIC20.19■□□□□ 0.82
SH3KBP1Q96B97 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SH3KBP1Q96B97 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.19■□□□□ 0.82
SH3KBP1Q96B97 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SH3KBP1Q96B97 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH3KBP1Q96B97 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH3KBP1Q96B97 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SH3KBP1Q96B97 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH3KBP1Q96B97 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH3KBP1Q96B97 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SH3KBP1Q96B97 AC010980.2-201ENST00000587099 1412 ntBASIC20.19■□□□□ 0.82
SH3KBP1Q96B97 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH3KBP1Q96B97 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SH3KBP1Q96B97 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH3KBP1Q96B97 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH3KBP1Q96B97 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.18■□□□□ 0.82
SH3KBP1Q96B97 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH3KBP1Q96B97 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SH3KBP1Q96B97 BX276092.2-201ENST00000417668 665 ntBASIC20.18■□□□□ 0.82
SH3KBP1Q96B97 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH3KBP1Q96B97 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.18■□□□□ 0.82
SH3KBP1Q96B97 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.18■□□□□ 0.82
SH3KBP1Q96B97 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.18■□□□□ 0.82
SH3KBP1Q96B97 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH3KBP1Q96B97 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH3KBP1Q96B97 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH3KBP1Q96B97 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SH3KBP1Q96B97 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.18■□□□□ 0.82
SH3KBP1Q96B97 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH3KBP1Q96B97 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH3KBP1Q96B97 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SH3KBP1Q96B97 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH3KBP1Q96B97 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH3KBP1Q96B97 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH3KBP1Q96B97 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.17■□□□□ 0.82
SH3KBP1Q96B97 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SH3KBP1Q96B97 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.17■□□□□ 0.82
SH3KBP1Q96B97 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SH3KBP1Q96B97 AC100791.3-201ENST00000617619 330 ntBASIC20.17■□□□□ 0.82
SH3KBP1Q96B97 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH3KBP1Q96B97 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms