Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRUNE2Q8WUY3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21.62■■□□□ 1.05
PRUNE2Q8WUY3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PRUNE2Q8WUY3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PRUNE2Q8WUY3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRUNE2Q8WUY3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRUNE2Q8WUY3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRUNE2Q8WUY3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PRUNE2Q8WUY3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.61■■□□□ 1.05
PRUNE2Q8WUY3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
PRUNE2Q8WUY3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PRUNE2Q8WUY3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRUNE2Q8WUY3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRUNE2Q8WUY3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PRUNE2Q8WUY3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.61■■□□□ 1.05
PRUNE2Q8WUY3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PRUNE2Q8WUY3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PRUNE2Q8WUY3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRUNE2Q8WUY3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRUNE2Q8WUY3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
PRUNE2Q8WUY3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
PRUNE2Q8WUY3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
PRUNE2Q8WUY3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRUNE2Q8WUY3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.61■■□□□ 1.05
PRUNE2Q8WUY3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.61■■□□□ 1.05
PRUNE2Q8WUY3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.61■■□□□ 1.05
PRUNE2Q8WUY3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PRUNE2Q8WUY3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRUNE2Q8WUY3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.6■■□□□ 1.05
PRUNE2Q8WUY3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRUNE2Q8WUY3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.6■■□□□ 1.05
PRUNE2Q8WUY3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.6■■□□□ 1.05
PRUNE2Q8WUY3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.6■■□□□ 1.05
PRUNE2Q8WUY3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PRUNE2Q8WUY3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
PRUNE2Q8WUY3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.6■■□□□ 1.05
PRUNE2Q8WUY3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRUNE2Q8WUY3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
PRUNE2Q8WUY3 HCG4P8-203ENST00000443049 980 ntBASIC21.6■■□□□ 1.05
PRUNE2Q8WUY3 FITM1-202ENST00000559294 800 ntBASIC21.6■■□□□ 1.05
PRUNE2Q8WUY3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRUNE2Q8WUY3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PRUNE2Q8WUY3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRUNE2Q8WUY3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRUNE2Q8WUY3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.59■■□□□ 1.05
PRUNE2Q8WUY3 AC063952.2-201ENST00000498792 1227 ntBASIC21.59■■□□□ 1.05
PRUNE2Q8WUY3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.59■■□□□ 1.05
PRUNE2Q8WUY3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
PRUNE2Q8WUY3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRUNE2Q8WUY3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.59■■□□□ 1.05
PRUNE2Q8WUY3 AK4P3-201ENST00000418260 669 ntBASIC21.59■■□□□ 1.05
PRUNE2Q8WUY3 KRT16P5-201ENST00000455284 522 ntBASIC21.59■■□□□ 1.05
PRUNE2Q8WUY3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PRUNE2Q8WUY3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.59■■□□□ 1.05
PRUNE2Q8WUY3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PRUNE2Q8WUY3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.58■■□□□ 1.05
PRUNE2Q8WUY3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
PRUNE2Q8WUY3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.58■■□□□ 1.05
PRUNE2Q8WUY3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.58■■□□□ 1.05
PRUNE2Q8WUY3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.58■■□□□ 1.05
PRUNE2Q8WUY3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PRUNE2Q8WUY3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PRUNE2Q8WUY3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.58■■□□□ 1.05
PRUNE2Q8WUY3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
PRUNE2Q8WUY3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.58■■□□□ 1.05
PRUNE2Q8WUY3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.58■■□□□ 1.04
PRUNE2Q8WUY3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.58■■□□□ 1.04
PRUNE2Q8WUY3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.58■■□□□ 1.04
PRUNE2Q8WUY3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
PRUNE2Q8WUY3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.58■■□□□ 1.04
PRUNE2Q8WUY3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PRUNE2Q8WUY3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
PRUNE2Q8WUY3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PRUNE2Q8WUY3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
PRUNE2Q8WUY3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.57■■□□□ 1.04
PRUNE2Q8WUY3 PVRIG2P-201ENST00000435460 978 ntBASIC21.57■■□□□ 1.04
PRUNE2Q8WUY3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.57■■□□□ 1.04
PRUNE2Q8WUY3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PRUNE2Q8WUY3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRUNE2Q8WUY3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.57■■□□□ 1.04
PRUNE2Q8WUY3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRUNE2Q8WUY3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.57■■□□□ 1.04
PRUNE2Q8WUY3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.57■■□□□ 1.04
PRUNE2Q8WUY3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.57■■□□□ 1.04
PRUNE2Q8WUY3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRUNE2Q8WUY3 AC092068.2-201ENST00000590491 1708 ntBASIC21.57■■□□□ 1.04
PRUNE2Q8WUY3 HTR7P1-201ENST00000538670 1336 ntBASIC21.57■■□□□ 1.04
PRUNE2Q8WUY3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.57■■□□□ 1.04
PRUNE2Q8WUY3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.57■■□□□ 1.04
PRUNE2Q8WUY3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.56■■□□□ 1.04
PRUNE2Q8WUY3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRUNE2Q8WUY3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.56■■□□□ 1.04
PRUNE2Q8WUY3 AC093323.1-202ENST00000635031 2045 ntBASIC21.56■■□□□ 1.04
PRUNE2Q8WUY3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PRUNE2Q8WUY3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PRUNE2Q8WUY3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRUNE2Q8WUY3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.56■■□□□ 1.04
PRUNE2Q8WUY3 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRUNE2Q8WUY3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRUNE2Q8WUY3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms