Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC63Q8NA47 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC63Q8NA47 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC63Q8NA47 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC63Q8NA47 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC63Q8NA47 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC63Q8NA47 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC63Q8NA47 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC63Q8NA47 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC63Q8NA47 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC63Q8NA47 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC63Q8NA47 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC63Q8NA47 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC63Q8NA47 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC63Q8NA47 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC63Q8NA47 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC63Q8NA47 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC63Q8NA47 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC63Q8NA47 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC63Q8NA47 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC63Q8NA47 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC63Q8NA47 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC63Q8NA47 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC63Q8NA47 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC63Q8NA47 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC63Q8NA47 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC63Q8NA47 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC63Q8NA47 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC63Q8NA47 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CCDC63Q8NA47 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC63Q8NA47 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC63Q8NA47 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CCDC63Q8NA47 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC63Q8NA47 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC63Q8NA47 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC63Q8NA47 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC63Q8NA47 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC63Q8NA47 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC63Q8NA47 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.68■□□□□ 0.9
CCDC63Q8NA47 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.68■□□□□ 0.9
CCDC63Q8NA47 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC63Q8NA47 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CCDC63Q8NA47 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC63Q8NA47 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC63Q8NA47 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC63Q8NA47 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
CCDC63Q8NA47 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CCDC63Q8NA47 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC63Q8NA47 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC63Q8NA47 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC63Q8NA47 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC63Q8NA47 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC63Q8NA47 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC63Q8NA47 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CCDC63Q8NA47 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC63Q8NA47 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC63Q8NA47 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC63Q8NA47 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC63Q8NA47 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC63Q8NA47 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC63Q8NA47 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CCDC63Q8NA47 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC63Q8NA47 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC63Q8NA47 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC63Q8NA47 AL356441.2-201ENST00000443009 864 ntBASIC20.67■□□□□ 0.9
CCDC63Q8NA47 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC63Q8NA47 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC63Q8NA47 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC63Q8NA47 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC63Q8NA47 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC63Q8NA47 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC63Q8NA47 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC63Q8NA47 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CCDC63Q8NA47 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC63Q8NA47 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC63Q8NA47 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CCDC63Q8NA47 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC63Q8NA47 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC63Q8NA47 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC63Q8NA47 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC63Q8NA47 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC63Q8NA47 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC63Q8NA47 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC63Q8NA47 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC63Q8NA47 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC63Q8NA47 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC63Q8NA47 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC63Q8NA47 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC63Q8NA47 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC63Q8NA47 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC63Q8NA47 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC63Q8NA47 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC63Q8NA47 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC63Q8NA47 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC63Q8NA47 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC63Q8NA47 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC63Q8NA47 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC63Q8NA47 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC63Q8NA47 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC63Q8NA47 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms