Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
NME8Q8N427 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NME8Q8N427 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
NME8Q8N427 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
NME8Q8N427 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NME8Q8N427 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.56■■□□□ 1.2
NME8Q8N427 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
NME8Q8N427 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
NME8Q8N427 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.56■■□□□ 1.2
NME8Q8N427 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.56■■□□□ 1.2
NME8Q8N427 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.56■■□□□ 1.2
NME8Q8N427 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
NME8Q8N427 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
NME8Q8N427 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
NME8Q8N427 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NME8Q8N427 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NME8Q8N427 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
NME8Q8N427 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NME8Q8N427 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.55■■□□□ 1.2
NME8Q8N427 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NME8Q8N427 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
NME8Q8N427 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
NME8Q8N427 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.55■■□□□ 1.2
NME8Q8N427 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NME8Q8N427 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NME8Q8N427 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.55■■□□□ 1.2
NME8Q8N427 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC22.55■■□□□ 1.2
NME8Q8N427 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.55■■□□□ 1.2
NME8Q8N427 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC22.55■■□□□ 1.2
NME8Q8N427 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC22.55■■□□□ 1.2
NME8Q8N427 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
NME8Q8N427 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NME8Q8N427 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
NME8Q8N427 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
NME8Q8N427 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
NME8Q8N427 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NME8Q8N427 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NME8Q8N427 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
NME8Q8N427 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.54■■□□□ 1.2
NME8Q8N427 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.54■■□□□ 1.2
NME8Q8N427 AC244015.2-201ENST00000616358 1861 ntBASIC22.54■■□□□ 1.2
NME8Q8N427 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NME8Q8N427 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NME8Q8N427 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NME8Q8N427 UBE2SP1-201ENST00000450587 669 ntBASIC22.54■■□□□ 1.2
NME8Q8N427 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NME8Q8N427 SOX15-203ENST00000570788 1093 ntBASIC22.54■■□□□ 1.2
NME8Q8N427 AL356652.1-201ENST00000615962 565 ntBASIC22.54■■□□□ 1.2
NME8Q8N427 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NME8Q8N427 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NME8Q8N427 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NME8Q8N427 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
NME8Q8N427 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NME8Q8N427 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NME8Q8N427 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NME8Q8N427 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NME8Q8N427 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NME8Q8N427 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
NME8Q8N427 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.53■■□□□ 1.2
NME8Q8N427 RN7SL471P-201ENST00000580476 299 ntBASIC22.53■■□□□ 1.2
NME8Q8N427 AL359736.2-201ENST00000621992 437 ntBASIC22.53■■□□□ 1.2
NME8Q8N427 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC22.53■■□□□ 1.2
NME8Q8N427 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.53■■□□□ 1.2
NME8Q8N427 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
NME8Q8N427 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NME8Q8N427 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NME8Q8N427 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.52■■□□□ 1.2
NME8Q8N427 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
NME8Q8N427 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NME8Q8N427 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC22.52■■□□□ 1.2
NME8Q8N427 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NME8Q8N427 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NME8Q8N427 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC22.52■■□□□ 1.2
NME8Q8N427 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.52■■□□□ 1.2
NME8Q8N427 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC22.52■■□□□ 1.2
NME8Q8N427 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC22.52■■□□□ 1.2
NME8Q8N427 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC22.52■■□□□ 1.2
NME8Q8N427 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
NME8Q8N427 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
NME8Q8N427 EP400NL-214ENST00000641289 2402 ntBASIC22.52■■□□□ 1.2
NME8Q8N427 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
NME8Q8N427 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NME8Q8N427 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.52■■□□□ 1.2
NME8Q8N427 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
NME8Q8N427 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NME8Q8N427 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NME8Q8N427 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
NME8Q8N427 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NME8Q8N427 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
NME8Q8N427 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
NME8Q8N427 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
NME8Q8N427 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NME8Q8N427 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NME8Q8N427 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NME8Q8N427 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC22.51■■□□□ 1.19
NME8Q8N427 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
NME8Q8N427 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
NME8Q8N427 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NME8Q8N427 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NME8Q8N427 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms