Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CCDC146Q8IYE0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CCDC146Q8IYE0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC27.16■■□□□ 1.94
CCDC146Q8IYE0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC27.16■■□□□ 1.94
CCDC146Q8IYE0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
CCDC146Q8IYE0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CCDC146Q8IYE0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC27.16■■□□□ 1.94
CCDC146Q8IYE0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC27.16■■□□□ 1.94
CCDC146Q8IYE0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC27.16■■□□□ 1.94
CCDC146Q8IYE0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC27.16■■□□□ 1.94
CCDC146Q8IYE0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CCDC146Q8IYE0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC27.16■■□□□ 1.94
CCDC146Q8IYE0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC27.16■■□□□ 1.94
CCDC146Q8IYE0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CCDC146Q8IYE0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CCDC146Q8IYE0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CCDC146Q8IYE0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC27.16■■□□□ 1.94
CCDC146Q8IYE0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CCDC146Q8IYE0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
CCDC146Q8IYE0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
CCDC146Q8IYE0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
CCDC146Q8IYE0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CCDC146Q8IYE0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC27.15■■□□□ 1.94
CCDC146Q8IYE0 HLA-L-209ENST00000420110 1011 ntBASIC27.15■■□□□ 1.94
CCDC146Q8IYE0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CCDC146Q8IYE0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC27.15■■□□□ 1.94
CCDC146Q8IYE0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
CCDC146Q8IYE0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
CCDC146Q8IYE0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CCDC146Q8IYE0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC27.15■■□□□ 1.94
CCDC146Q8IYE0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CCDC146Q8IYE0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CCDC146Q8IYE0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CCDC146Q8IYE0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
CCDC146Q8IYE0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
CCDC146Q8IYE0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
CCDC146Q8IYE0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
CCDC146Q8IYE0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CCDC146Q8IYE0 GPX1P1-201ENST00000388829 606 ntBASIC27.14■■□□□ 1.94
CCDC146Q8IYE0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC27.14■■□□□ 1.94
CCDC146Q8IYE0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC27.14■■□□□ 1.94
CCDC146Q8IYE0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC27.14■■□□□ 1.94
CCDC146Q8IYE0 BID-203ENST00000399765 1879 ntTSL 2 BASIC27.14■■□□□ 1.94
CCDC146Q8IYE0 KRT17P1-201ENST00000399211 1546 ntBASIC27.14■■□□□ 1.94
CCDC146Q8IYE0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
CCDC146Q8IYE0 MKRN4P-201ENST00000444706 1521 ntBASIC27.14■■□□□ 1.94
CCDC146Q8IYE0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CCDC146Q8IYE0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC27.14■■□□□ 1.93
CCDC146Q8IYE0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CCDC146Q8IYE0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
CCDC146Q8IYE0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC27.13■■□□□ 1.93
CCDC146Q8IYE0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CCDC146Q8IYE0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC27.13■■□□□ 1.93
CCDC146Q8IYE0 TSPY6P-201ENST00000448518 926 ntBASIC27.13■■□□□ 1.93
CCDC146Q8IYE0 AC104771.1-201ENST00000603335 964 ntBASIC27.13■■□□□ 1.93
CCDC146Q8IYE0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC27.13■■□□□ 1.93
CCDC146Q8IYE0 MIR2861-201ENST00000636310 90 ntBASIC27.13■■□□□ 1.93
CCDC146Q8IYE0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CCDC146Q8IYE0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CCDC146Q8IYE0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CCDC146Q8IYE0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC27.13■■□□□ 1.93
CCDC146Q8IYE0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC27.13■■□□□ 1.93
CCDC146Q8IYE0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CCDC146Q8IYE0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CCDC146Q8IYE0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC27.13■■□□□ 1.93
CCDC146Q8IYE0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CCDC146Q8IYE0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC27.13■■□□□ 1.93
CCDC146Q8IYE0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC27.12■■□□□ 1.93
CCDC146Q8IYE0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC27.12■■□□□ 1.93
CCDC146Q8IYE0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CCDC146Q8IYE0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
CCDC146Q8IYE0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CCDC146Q8IYE0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC27.12■■□□□ 1.93
CCDC146Q8IYE0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CCDC146Q8IYE0 AL109923.1-201ENST00000618799 583 ntBASIC27.12■■□□□ 1.93
CCDC146Q8IYE0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CCDC146Q8IYE0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CCDC146Q8IYE0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC27.12■■□□□ 1.93
CCDC146Q8IYE0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CCDC146Q8IYE0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
CCDC146Q8IYE0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CCDC146Q8IYE0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC27.11■■□□□ 1.93
CCDC146Q8IYE0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CCDC146Q8IYE0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC27.11■■□□□ 1.93
CCDC146Q8IYE0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC27.11■■□□□ 1.93
CCDC146Q8IYE0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CCDC146Q8IYE0 AC098934.4-201ENST00000564127 592 ntBASIC27.11■■□□□ 1.93
CCDC146Q8IYE0 AL138781.1-201ENST00000566567 1274 ntBASIC27.11■■□□□ 1.93
CCDC146Q8IYE0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC27.11■■□□□ 1.93
CCDC146Q8IYE0 CYP2T3P-201ENST00000601990 817 ntBASIC27.11■■□□□ 1.93
CCDC146Q8IYE0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
CCDC146Q8IYE0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
CCDC146Q8IYE0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC27.11■■□□□ 1.93
CCDC146Q8IYE0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC27.11■■□□□ 1.93
CCDC146Q8IYE0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
CCDC146Q8IYE0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
CCDC146Q8IYE0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
CCDC146Q8IYE0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CCDC146Q8IYE0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CCDC146Q8IYE0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC27.1■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms