Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LYSMD2Q8IV50 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LYSMD2Q8IV50 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LYSMD2Q8IV50 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.97■□□□□ 0.47
LYSMD2Q8IV50 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.97■□□□□ 0.47
LYSMD2Q8IV50 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LYSMD2Q8IV50 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.97■□□□□ 0.47
LYSMD2Q8IV50 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LYSMD2Q8IV50 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LYSMD2Q8IV50 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.97■□□□□ 0.47
LYSMD2Q8IV50 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.97■□□□□ 0.47
LYSMD2Q8IV50 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LYSMD2Q8IV50 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
LYSMD2Q8IV50 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
LYSMD2Q8IV50 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD2Q8IV50 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.96■□□□□ 0.47
LYSMD2Q8IV50 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
LYSMD2Q8IV50 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD2Q8IV50 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.96■□□□□ 0.47
LYSMD2Q8IV50 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LYSMD2Q8IV50 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD2Q8IV50 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.47
LYSMD2Q8IV50 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.96■□□□□ 0.47
LYSMD2Q8IV50 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD2Q8IV50 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD2Q8IV50 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD2Q8IV50 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.96■□□□□ 0.47
LYSMD2Q8IV50 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LYSMD2Q8IV50 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD2Q8IV50 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.96■□□□□ 0.47
LYSMD2Q8IV50 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.96■□□□□ 0.47
LYSMD2Q8IV50 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD2Q8IV50 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD2Q8IV50 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD2Q8IV50 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD2Q8IV50 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD2Q8IV50 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD2Q8IV50 AC003102.1-202ENST00000563394 1796 ntBASIC17.96■□□□□ 0.47
LYSMD2Q8IV50 AC020916.1-201ENST00000587762 1774 ntBASIC17.96■□□□□ 0.47
LYSMD2Q8IV50 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.96■□□□□ 0.47
LYSMD2Q8IV50 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.96■□□□□ 0.47
LYSMD2Q8IV50 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
LYSMD2Q8IV50 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD2Q8IV50 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LYSMD2Q8IV50 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD2Q8IV50 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD2Q8IV50 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LYSMD2Q8IV50 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.95■□□□□ 0.46
LYSMD2Q8IV50 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.95■□□□□ 0.46
LYSMD2Q8IV50 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.95■□□□□ 0.46
LYSMD2Q8IV50 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD2Q8IV50 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD2Q8IV50 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD2Q8IV50 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD2Q8IV50 KRT8P33-201ENST00000508125 1423 ntBASIC17.95■□□□□ 0.46
LYSMD2Q8IV50 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD2Q8IV50 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.95■□□□□ 0.46
LYSMD2Q8IV50 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LYSMD2Q8IV50 AC093484.2-201ENST00000580996 2166 ntBASIC17.94■□□□□ 0.46
LYSMD2Q8IV50 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.94■□□□□ 0.46
LYSMD2Q8IV50 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD2Q8IV50 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD2Q8IV50 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LYSMD2Q8IV50 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD2Q8IV50 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD2Q8IV50 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LYSMD2Q8IV50 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
LYSMD2Q8IV50 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.94■□□□□ 0.46
LYSMD2Q8IV50 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
LYSMD2Q8IV50 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD2Q8IV50 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.94■□□□□ 0.46
LYSMD2Q8IV50 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD2Q8IV50 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
LYSMD2Q8IV50 YBX1P4-201ENST00000392794 808 ntBASIC17.94■□□□□ 0.46
LYSMD2Q8IV50 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
LYSMD2Q8IV50 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD2Q8IV50 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD2Q8IV50 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD2Q8IV50 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD2Q8IV50 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.94■□□□□ 0.46
LYSMD2Q8IV50 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD2Q8IV50 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD2Q8IV50 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD2Q8IV50 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD2Q8IV50 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.94■□□□□ 0.46
LYSMD2Q8IV50 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD2Q8IV50 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
LYSMD2Q8IV50 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
LYSMD2Q8IV50 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
LYSMD2Q8IV50 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
LYSMD2Q8IV50 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD2Q8IV50 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD2Q8IV50 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.93■□□□□ 0.46
LYSMD2Q8IV50 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD2Q8IV50 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.93■□□□□ 0.46
LYSMD2Q8IV50 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.93■□□□□ 0.46
LYSMD2Q8IV50 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD2Q8IV50 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD2Q8IV50 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD2Q8IV50 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms