Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 C1orf229-201ENST00000623686 2258 ntBASIC14.36□□□□□ -0.11
CSMD3Q7Z407 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD3Q7Z407 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD3Q7Z407 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD3Q7Z407 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD3Q7Z407 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.36□□□□□ -0.11
CSMD3Q7Z407 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.36□□□□□ -0.11
CSMD3Q7Z407 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD3Q7Z407 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CSMD3Q7Z407 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD3Q7Z407 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CSMD3Q7Z407 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD3Q7Z407 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CSMD3Q7Z407 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD3Q7Z407 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD3Q7Z407 REXO2-208ENST00000539754 791 ntTSL 2 BASIC14.36□□□□□ -0.11
CSMD3Q7Z407 NTF6B-201ENST00000591913 560 ntBASIC14.36□□□□□ -0.11
CSMD3Q7Z407 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CSMD3Q7Z407 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD3Q7Z407 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC14.35□□□□□ -0.11
CSMD3Q7Z407 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CSMD3Q7Z407 AL121894.2-201ENST00000602977 491 ntBASIC14.35□□□□□ -0.11
CSMD3Q7Z407 AC010947.1-201ENST00000623454 693 ntBASIC14.35□□□□□ -0.11
CSMD3Q7Z407 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD3Q7Z407 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD3Q7Z407 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CSMD3Q7Z407 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
CSMD3Q7Z407 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CSMD3Q7Z407 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD3Q7Z407 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD3Q7Z407 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.35□□□□□ -0.11
CSMD3Q7Z407 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.35□□□□□ -0.11
CSMD3Q7Z407 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.35□□□□□ -0.11
CSMD3Q7Z407 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14.35□□□□□ -0.11
CSMD3Q7Z407 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD3Q7Z407 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD3Q7Z407 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD3Q7Z407 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD3Q7Z407 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC14.35□□□□□ -0.11
CSMD3Q7Z407 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CSMD3Q7Z407 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CSMD3Q7Z407 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD3Q7Z407 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD3Q7Z407 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD3Q7Z407 KRASP1-201ENST00000407852 552 ntBASIC14.35□□□□□ -0.11
CSMD3Q7Z407 CDV3P1-201ENST00000471403 739 ntBASIC14.35□□□□□ -0.11
CSMD3Q7Z407 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD3Q7Z407 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC14.34□□□□□ -0.11
CSMD3Q7Z407 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSMD3Q7Z407 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC14.34□□□□□ -0.11
CSMD3Q7Z407 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC14.34□□□□□ -0.11
CSMD3Q7Z407 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSMD3Q7Z407 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CSMD3Q7Z407 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSMD3Q7Z407 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.34□□□□□ -0.11
CSMD3Q7Z407 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSMD3Q7Z407 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.34□□□□□ -0.11
CSMD3Q7Z407 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSMD3Q7Z407 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CSMD3Q7Z407 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSMD3Q7Z407 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSMD3Q7Z407 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSMD3Q7Z407 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.34□□□□□ -0.11
CSMD3Q7Z407 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.34□□□□□ -0.11
CSMD3Q7Z407 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSMD3Q7Z407 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CSMD3Q7Z407 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.34□□□□□ -0.11
CSMD3Q7Z407 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSMD3Q7Z407 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSMD3Q7Z407 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSMD3Q7Z407 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.33□□□□□ -0.11
CSMD3Q7Z407 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CSMD3Q7Z407 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC14.33□□□□□ -0.11
CSMD3Q7Z407 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC14.33□□□□□ -0.11
CSMD3Q7Z407 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.33□□□□□ -0.11
CSMD3Q7Z407 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.33□□□□□ -0.11
CSMD3Q7Z407 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CSMD3Q7Z407 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC14.33□□□□□ -0.11
CSMD3Q7Z407 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CSMD3Q7Z407 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSMD3Q7Z407 AC079598.2-202ENST00000546624 1451 ntBASIC14.33□□□□□ -0.12
CSMD3Q7Z407 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSMD3Q7Z407 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.33□□□□□ -0.12
CSMD3Q7Z407 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSMD3Q7Z407 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSMD3Q7Z407 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSMD3Q7Z407 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSMD3Q7Z407 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSMD3Q7Z407 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSMD3Q7Z407 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSMD3Q7Z407 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.33□□□□□ -0.12
CSMD3Q7Z407 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.33□□□□□ -0.12
CSMD3Q7Z407 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSMD3Q7Z407 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC14.32□□□□□ -0.12
CSMD3Q7Z407 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.32□□□□□ -0.12
CSMD3Q7Z407 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.32□□□□□ -0.12
CSMD3Q7Z407 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD3Q7Z407 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD3Q7Z407 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CSMD3Q7Z407 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms