Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
OTOP1Q7RTM1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
OTOP1Q7RTM1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
OTOP1Q7RTM1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
OTOP1Q7RTM1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
OTOP1Q7RTM1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
OTOP1Q7RTM1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
OTOP1Q7RTM1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
OTOP1Q7RTM1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.82■■□□□ 1.4
OTOP1Q7RTM1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
OTOP1Q7RTM1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC23.82■■□□□ 1.4
OTOP1Q7RTM1 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC23.82■■□□□ 1.4
OTOP1Q7RTM1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
OTOP1Q7RTM1 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC23.82■■□□□ 1.4
OTOP1Q7RTM1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
OTOP1Q7RTM1 AL049597.2-201ENST00000565575 961 ntBASIC23.82■■□□□ 1.4
OTOP1Q7RTM1 AL353708.3-201ENST00000610272 989 ntBASIC23.82■■□□□ 1.4
OTOP1Q7RTM1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC23.82■■□□□ 1.4
OTOP1Q7RTM1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC23.82■■□□□ 1.4
OTOP1Q7RTM1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.82■■□□□ 1.4
OTOP1Q7RTM1 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
OTOP1Q7RTM1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
OTOP1Q7RTM1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
OTOP1Q7RTM1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
OTOP1Q7RTM1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
OTOP1Q7RTM1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
OTOP1Q7RTM1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
OTOP1Q7RTM1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
OTOP1Q7RTM1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
OTOP1Q7RTM1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
OTOP1Q7RTM1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC23.81■■□□□ 1.4
OTOP1Q7RTM1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC23.81■■□□□ 1.4
OTOP1Q7RTM1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC23.81■■□□□ 1.4
OTOP1Q7RTM1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
OTOP1Q7RTM1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
OTOP1Q7RTM1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
OTOP1Q7RTM1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
OTOP1Q7RTM1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC23.81■■□□□ 1.4
OTOP1Q7RTM1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
OTOP1Q7RTM1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
OTOP1Q7RTM1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
OTOP1Q7RTM1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
OTOP1Q7RTM1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.8■■□□□ 1.4
OTOP1Q7RTM1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
OTOP1Q7RTM1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
OTOP1Q7RTM1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
OTOP1Q7RTM1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
OTOP1Q7RTM1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
OTOP1Q7RTM1 AC239809.2-201ENST00000415381 517 ntBASIC23.8■■□□□ 1.4
OTOP1Q7RTM1 PENK-204ENST00000518770 863 ntTSL 2 BASIC23.8■■□□□ 1.4
OTOP1Q7RTM1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
OTOP1Q7RTM1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.8■■□□□ 1.4
OTOP1Q7RTM1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC23.8■■□□□ 1.4
OTOP1Q7RTM1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
OTOP1Q7RTM1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.8■■□□□ 1.4
OTOP1Q7RTM1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.8■■□□□ 1.4
OTOP1Q7RTM1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
OTOP1Q7RTM1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.8■■□□□ 1.4
OTOP1Q7RTM1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
OTOP1Q7RTM1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
OTOP1Q7RTM1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
OTOP1Q7RTM1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
OTOP1Q7RTM1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
OTOP1Q7RTM1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
OTOP1Q7RTM1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
OTOP1Q7RTM1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
OTOP1Q7RTM1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
OTOP1Q7RTM1 HES2-205ENST00000487437 968 ntTSL 3 BASIC23.79■■□□□ 1.4
OTOP1Q7RTM1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC23.79■■□□□ 1.4
OTOP1Q7RTM1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
OTOP1Q7RTM1 PRKY-204ENST00000533551 1019 ntBASIC23.79■■□□□ 1.4
OTOP1Q7RTM1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC23.79■■□□□ 1.4
OTOP1Q7RTM1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC23.79■■□□□ 1.4
OTOP1Q7RTM1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC23.79■■□□□ 1.4
OTOP1Q7RTM1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
OTOP1Q7RTM1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
OTOP1Q7RTM1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC23.79■■□□□ 1.4
OTOP1Q7RTM1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
OTOP1Q7RTM1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
OTOP1Q7RTM1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
OTOP1Q7RTM1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
OTOP1Q7RTM1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.78■■□□□ 1.4
OTOP1Q7RTM1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
OTOP1Q7RTM1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.78■■□□□ 1.4
OTOP1Q7RTM1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
OTOP1Q7RTM1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC23.78■■□□□ 1.4
OTOP1Q7RTM1 WDR88-203ENST00000592765 651 ntTSL 5 BASIC23.78■■□□□ 1.4
OTOP1Q7RTM1 AC110285.5-201ENST00000611501 352 ntBASIC23.78■■□□□ 1.4
OTOP1Q7RTM1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC23.78■■□□□ 1.4
OTOP1Q7RTM1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
OTOP1Q7RTM1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.78■■□□□ 1.4
OTOP1Q7RTM1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.78■■□□□ 1.4
OTOP1Q7RTM1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.78■■□□□ 1.4
OTOP1Q7RTM1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
OTOP1Q7RTM1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
OTOP1Q7RTM1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
OTOP1Q7RTM1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
OTOP1Q7RTM1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.78■■□□□ 1.4
OTOP1Q7RTM1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
OTOP1Q7RTM1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms