Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.3■■□□□ 1
TTC39BQ5VTQ0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.3■■□□□ 1
TTC39BQ5VTQ0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TTC39BQ5VTQ0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TTC39BQ5VTQ0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.3■■□□□ 1
TTC39BQ5VTQ0 AL049796.1-201ENST00000565336 1766 ntBASIC21.3■■□□□ 1
TTC39BQ5VTQ0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.29■■□□□ 1
TTC39BQ5VTQ0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.29■■□□□ 1
TTC39BQ5VTQ0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TTC39BQ5VTQ0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TTC39BQ5VTQ0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TTC39BQ5VTQ0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.29■■□□□ 1
TTC39BQ5VTQ0 AC116050.2-201ENST00000612102 1779 ntBASIC21.29■■□□□ 1
TTC39BQ5VTQ0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.29■■□□□ 1
TTC39BQ5VTQ0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.29■■□□□ 1
TTC39BQ5VTQ0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.29■■□□□ 1
TTC39BQ5VTQ0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TTC39BQ5VTQ0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TTC39BQ5VTQ0 GUSBP6-202ENST00000438529 1198 ntBASIC21.29■■□□□ 1
TTC39BQ5VTQ0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.29■■□□□ 1
TTC39BQ5VTQ0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TTC39BQ5VTQ0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.29■■□□□ 1
TTC39BQ5VTQ0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.29■■□□□ 1
TTC39BQ5VTQ0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.29■■□□□ 1
TTC39BQ5VTQ0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TTC39BQ5VTQ0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.29■■□□□ 1
TTC39BQ5VTQ0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TTC39BQ5VTQ0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TTC39BQ5VTQ0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.28■■□□□ 1
TTC39BQ5VTQ0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TTC39BQ5VTQ0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TTC39BQ5VTQ0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.28■■□□□ 1
TTC39BQ5VTQ0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TTC39BQ5VTQ0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.28■■□□□ 1
TTC39BQ5VTQ0 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
TTC39BQ5VTQ0 AC100791.3-201ENST00000617619 330 ntBASIC21.28■■□□□ 1
TTC39BQ5VTQ0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TTC39BQ5VTQ0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.28■■□□□ 1
TTC39BQ5VTQ0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TTC39BQ5VTQ0 MKRN4P-201ENST00000444706 1521 ntBASIC21.28■■□□□ 1
TTC39BQ5VTQ0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TTC39BQ5VTQ0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.28■■□□□ 1
TTC39BQ5VTQ0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
TTC39BQ5VTQ0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TTC39BQ5VTQ0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TTC39BQ5VTQ0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.27■■□□□ 1
TTC39BQ5VTQ0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TTC39BQ5VTQ0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.27■□□□□ 0.99
TTC39BQ5VTQ0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
TTC39BQ5VTQ0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TTC39BQ5VTQ0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.26■□□□□ 0.99
TTC39BQ5VTQ0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.26■□□□□ 0.99
TTC39BQ5VTQ0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.26■□□□□ 0.99
TTC39BQ5VTQ0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.26■□□□□ 0.99
TTC39BQ5VTQ0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
TTC39BQ5VTQ0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.26■□□□□ 0.99
TTC39BQ5VTQ0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.26■□□□□ 0.99
TTC39BQ5VTQ0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.26■□□□□ 0.99
TTC39BQ5VTQ0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TTC39BQ5VTQ0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TTC39BQ5VTQ0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TTC39BQ5VTQ0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TTC39BQ5VTQ0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
TTC39BQ5VTQ0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.25■□□□□ 0.99
TTC39BQ5VTQ0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TTC39BQ5VTQ0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TTC39BQ5VTQ0 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
TTC39BQ5VTQ0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TTC39BQ5VTQ0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TTC39BQ5VTQ0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
TTC39BQ5VTQ0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.25■□□□□ 0.99
TTC39BQ5VTQ0 AC093787.1-201ENST00000450396 207 ntBASIC21.25■□□□□ 0.99
TTC39BQ5VTQ0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.25■□□□□ 0.99
TTC39BQ5VTQ0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.25■□□□□ 0.99
TTC39BQ5VTQ0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TTC39BQ5VTQ0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.25■□□□□ 0.99
TTC39BQ5VTQ0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.25■□□□□ 0.99
TTC39BQ5VTQ0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
TTC39BQ5VTQ0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.25■□□□□ 0.99
TTC39BQ5VTQ0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TTC39BQ5VTQ0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.25■□□□□ 0.99
TTC39BQ5VTQ0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
TTC39BQ5VTQ0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TTC39BQ5VTQ0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TTC39BQ5VTQ0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.24■□□□□ 0.99
TTC39BQ5VTQ0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TTC39BQ5VTQ0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
TTC39BQ5VTQ0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
TTC39BQ5VTQ0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TTC39BQ5VTQ0 AC010980.2-201ENST00000587099 1412 ntBASIC21.24■□□□□ 0.99
TTC39BQ5VTQ0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.24■□□□□ 0.99
TTC39BQ5VTQ0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TTC39BQ5VTQ0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.24■□□□□ 0.99
TTC39BQ5VTQ0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TTC39BQ5VTQ0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TTC39BQ5VTQ0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TTC39BQ5VTQ0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
TTC39BQ5VTQ0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.24■□□□□ 0.99
TTC39BQ5VTQ0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.24■□□□□ 0.99
TTC39BQ5VTQ0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms