Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
LGSNQ5TDP6 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LGSNQ5TDP6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.59■□□□□ 0.89
LGSNQ5TDP6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.59■□□□□ 0.89
LGSNQ5TDP6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.59■□□□□ 0.89
LGSNQ5TDP6 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
LGSNQ5TDP6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
LGSNQ5TDP6 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.59■□□□□ 0.89
LGSNQ5TDP6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.58■□□□□ 0.89
LGSNQ5TDP6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LGSNQ5TDP6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
LGSNQ5TDP6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.89
LGSNQ5TDP6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LGSNQ5TDP6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.58■□□□□ 0.89
LGSNQ5TDP6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LGSNQ5TDP6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.58■□□□□ 0.89
LGSNQ5TDP6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.58■□□□□ 0.89
LGSNQ5TDP6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
LGSNQ5TDP6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.58■□□□□ 0.89
LGSNQ5TDP6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.58■□□□□ 0.89
LGSNQ5TDP6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
LGSNQ5TDP6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LGSNQ5TDP6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
LGSNQ5TDP6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LGSNQ5TDP6 AC112907.3-201ENST00000577781 2400 ntBASIC20.58■□□□□ 0.88
LGSNQ5TDP6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.58■□□□□ 0.88
LGSNQ5TDP6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
LGSNQ5TDP6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LGSNQ5TDP6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.57■□□□□ 0.88
LGSNQ5TDP6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LGSNQ5TDP6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.57■□□□□ 0.88
LGSNQ5TDP6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.57■□□□□ 0.88
LGSNQ5TDP6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LGSNQ5TDP6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
LGSNQ5TDP6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.57■□□□□ 0.88
LGSNQ5TDP6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
LGSNQ5TDP6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.57■□□□□ 0.88
LGSNQ5TDP6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LGSNQ5TDP6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.57■□□□□ 0.88
LGSNQ5TDP6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LGSNQ5TDP6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.57■□□□□ 0.88
LGSNQ5TDP6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
LGSNQ5TDP6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
LGSNQ5TDP6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LGSNQ5TDP6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.57■□□□□ 0.88
LGSNQ5TDP6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LGSNQ5TDP6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.57■□□□□ 0.88
LGSNQ5TDP6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LGSNQ5TDP6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
LGSNQ5TDP6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LGSNQ5TDP6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LGSNQ5TDP6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LGSNQ5TDP6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.56■□□□□ 0.88
LGSNQ5TDP6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LGSNQ5TDP6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LGSNQ5TDP6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LGSNQ5TDP6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LGSNQ5TDP6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LGSNQ5TDP6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LGSNQ5TDP6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LGSNQ5TDP6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.56■□□□□ 0.88
LGSNQ5TDP6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.56■□□□□ 0.88
LGSNQ5TDP6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.56■□□□□ 0.88
LGSNQ5TDP6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LGSNQ5TDP6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.56■□□□□ 0.88
LGSNQ5TDP6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LGSNQ5TDP6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
LGSNQ5TDP6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LGSNQ5TDP6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
LGSNQ5TDP6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.56■□□□□ 0.88
LGSNQ5TDP6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LGSNQ5TDP6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LGSNQ5TDP6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.55■□□□□ 0.88
LGSNQ5TDP6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LGSNQ5TDP6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
LGSNQ5TDP6 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.55■□□□□ 0.88
LGSNQ5TDP6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LGSNQ5TDP6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LGSNQ5TDP6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LGSNQ5TDP6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LGSNQ5TDP6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LGSNQ5TDP6 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LGSNQ5TDP6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
LGSNQ5TDP6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.54■□□□□ 0.88
LGSNQ5TDP6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LGSNQ5TDP6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.54■□□□□ 0.88
LGSNQ5TDP6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.54■□□□□ 0.88
LGSNQ5TDP6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
LGSNQ5TDP6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LGSNQ5TDP6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LGSNQ5TDP6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LGSNQ5TDP6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
LGSNQ5TDP6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.54■□□□□ 0.88
LGSNQ5TDP6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LGSNQ5TDP6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.54■□□□□ 0.88
LGSNQ5TDP6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
LGSNQ5TDP6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.54■□□□□ 0.88
LGSNQ5TDP6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LGSNQ5TDP6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LGSNQ5TDP6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms