Protein–RNA interactions for Protein: Q07953

SDO1, Ribosome maturation protein SDO1, yeastyeast

Known RBP Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDO1Q07953 YGL218WYGL218W 651 nt1.7□□□□□ -2.14
SDO1Q07953 YIR020C-BYIR020C-B 735 nt1.7□□□□□ -2.14
SDO1Q07953 PSY1YKL076C 384 nt1.7□□□□□ -2.14
SDO1Q07953 TAP42YMR028W 1101 nt1.7□□□□□ -2.14
SDO1Q07953 YNL179CYNL179C 438 nt1.7□□□□□ -2.14
SDO1Q07953 SFG1YOR315W 1041 nt1.7□□□□□ -2.14
SDO1Q07953 RPB5YBR154C 648 nt1.7□□□□□ -2.14
SDO1Q07953 NAN1YPL126W 2691 nt1.7□□□□□ -2.14
SDO1Q07953 15S_rRNA15S_rRNA 1649 nt1.69□□□□□ -2.14
SDO1Q07953 SPC72YAL047C 1869 nt1.69□□□□□ -2.14
SDO1Q07953 UTP21YLR409C 2820 nt1.69□□□□□ -2.14
SDO1Q07953 YCR087C-AYCR087C-A 462 nt1.69□□□□□ -2.14
SDO1Q07953 NOP10YHR072W-A 177 nt1.69□□□□□ -2.14
SDO1Q07953 IST3YIR005W 447 nt1.69□□□□□ -2.14
SDO1Q07953 ALK2YBL009W 2031 nt1.69□□□□□ -2.14
SDO1Q07953 SOK2YMR016C 2358 nt1.69□□□□□ -2.14
SDO1Q07953 SPC2YML055W 537 nt1.68□□□□□ -2.14
SDO1Q07953 LSM7YNL147W 348 nt1.68□□□□□ -2.14
SDO1Q07953 PKH3YDR466W 2697 nt1.68□□□□□ -2.14
SDO1Q07953 GRR1YJR090C 3456 nt1.68□□□□□ -2.14
SDO1Q07953 RTP1YMR185W 2946 nt1.67□□□□□ -2.14
SDO1Q07953 BFA1YJR053W 1725 nt1.67□□□□□ -2.14
SDO1Q07953 YDR286CYDR286C 345 nt1.67□□□□□ -2.14
SDO1Q07953 PEA2YER149C 1263 nt1.67□□□□□ -2.14
SDO1Q07953 YGL230CYGL230C 444 nt1.67□□□□□ -2.14
SDO1Q07953 YAP5YIR018W 738 nt1.67□□□□□ -2.14
SDO1Q07953 YLR458WYLR458W 381 nt1.67□□□□□ -2.14
SDO1Q07953 END3YNL084C 1050 nt1.67□□□□□ -2.14
SDO1Q07953 SET2YJL168C 2202 nt1.67□□□□□ -2.14
SDO1Q07953 YLR035C-AYLR035C-A 3468 nt1.66□□□□□ -2.14
SDO1Q07953 VPS35YJL154C 2835 nt1.66□□□□□ -2.14
SDO1Q07953 YDL009CYDL009C 324 nt1.66□□□□□ -2.14
SDO1Q07953 CWC23YGL128C 852 nt1.66□□□□□ -2.14
SDO1Q07953 YHR050W-AYHR050W-A 171 nt1.66□□□□□ -2.14
SDO1Q07953 YJL133C-AYJL133C-A 225 nt1.66□□□□□ -2.14
SDO1Q07953 YLR217WYLR217W 324 nt1.66□□□□□ -2.14
SDO1Q07953 HHT2YNL031C 411 nt1.66□□□□□ -2.14
SDO1Q07953 RIO2YNL207W 1278 nt1.66□□□□□ -2.14
SDO1Q07953 YPL238CYPL238C 390 nt1.66□□□□□ -2.14
SDO1Q07953 snR43snR43 209 nt1.66□□□□□ -2.14
SDO1Q07953 NCS2YNL119W 1482 nt1.66□□□□□ -2.14
SDO1Q07953 PEP1YBL017C 4740 nt1.66□□□□□ -2.14
SDO1Q07953 STB4YMR019W 2850 nt1.66□□□□□ -2.14
SDO1Q07953 VPS41YDR080W 2979 nt1.66□□□□□ -2.14
SDO1Q07953 YDL062WYDL062W 426 nt1.65□□□□□ -2.15
SDO1Q07953 VPS74YDR372C 1038 nt1.65□□□□□ -2.15
SDO1Q07953 YGR109W-AYGR109W-A 873 nt1.65□□□□□ -2.15
SDO1Q07953 LIN1YHR156C 1023 nt1.65□□□□□ -2.15
SDO1Q07953 YIL082WYIL082W 873 nt1.65□□□□□ -2.15
SDO1Q07953 YIR018C-AYIR018C-A 138 nt1.65□□□□□ -2.15
SDO1Q07953 CRM1YGR218W 3255 nt1.65□□□□□ -2.15
SDO1Q07953 DNF3YMR162C 4971 nt1.64□□□□□ -2.15
SDO1Q07953 RPH1YER169W 2391 nt1.64□□□□□ -2.15
SDO1Q07953 YER172C-AYER172C-A 381 nt1.64□□□□□ -2.15
SDO1Q07953 RPL40AYIL148W 387 nt1.64□□□□□ -2.15
SDO1Q07953 PDP3YLR455W 915 nt1.64□□□□□ -2.15
SDO1Q07953 SAR1YPL218W 573 nt1.64□□□□□ -2.15
SDO1Q07953 YPP1YGR198W 2454 nt1.64□□□□□ -2.15
SDO1Q07953 TFC8YPL007C 1767 nt1.64□□□□□ -2.15
SDO1Q07953 YOR343W-BYOR343W-B 5313 nt1.63□□□□□ -2.15
SDO1Q07953 APL5YPL195W 2799 nt1.63□□□□□ -2.15
SDO1Q07953 CRD1YDL142C 852 nt1.63□□□□□ -2.15
SDO1Q07953 YER158W-AYER158W-A 216 nt1.63□□□□□ -2.15
SDO1Q07953 RAD6YGL058W 519 nt1.63□□□□□ -2.15
SDO1Q07953 SMD1YGR074W 441 nt1.63□□□□□ -2.15
SDO1Q07953 RPL36BYPL249C-A 303 nt1.63□□□□□ -2.15
SDO1Q07953 MSS18YPR134W 807 nt1.63□□□□□ -2.15
SDO1Q07953 FIG2YCR089W 4830 nt1.63□□□□□ -2.15
SDO1Q07953 RPN3YER021W 1572 nt1.63□□□□□ -2.15
SDO1Q07953 SSQ1YLR369W 1974 nt1.63□□□□□ -2.15
SDO1Q07953 BRO1YPL084W 2535 nt1.63□□□□□ -2.15
SDO1Q07953 VPS15YBR097W 4365 nt1.62□□□□□ -2.15
SDO1Q07953 IRA1YBR140C 9279 nt1.62□□□□□ -2.15
SDO1Q07953 VTC3YPL019C 2508 nt1.62□□□□□ -2.15
SDO1Q07953 YJR039WYJR039W 3366 nt1.62□□□□□ -2.15
SDO1Q07953 PAU3YCR104W 375 nt1.62□□□□□ -2.15
SDO1Q07953 RPL29YFR032C-A 180 nt1.62□□□□□ -2.15
SDO1Q07953 BRP1YGL007W 378 nt1.62□□□□□ -2.15
SDO1Q07953 YLR302CYLR302C 363 nt1.62□□□□□ -2.15
SDO1Q07953 UBC12YLR306W 567 nt1.62□□□□□ -2.15
SDO1Q07953 BRX1YOL077C 876 nt1.62□□□□□ -2.15
SDO1Q07953 APM3YBR288C 1452 nt1.62□□□□□ -2.15
SDO1Q07953 SSY1YDR160W 2559 nt1.61□□□□□ -2.15
SDO1Q07953 SPO22YIL073C 2928 nt1.61□□□□□ -2.15
SDO1Q07953 PBP4YDL053C 558 nt1.61□□□□□ -2.15
SDO1Q07953 YGL042CYGL042C 306 nt1.61□□□□□ -2.15
SDO1Q07953 CCW14YLR390W-A 717 nt1.61□□□□□ -2.15
SDO1Q07953 LSM2YBL026W 288 nt1.61□□□□□ -2.15
SDO1Q07953 VPS38YLR360W 1320 nt1.61□□□□□ -2.15
SDO1Q07953 VPS34YLR240W 2628 nt1.6□□□□□ -2.15
SDO1Q07953 snR59snR59 78 nt1.6□□□□□ -2.15
SDO1Q07953 YDR248CYDR248C 582 nt1.6□□□□□ -2.15
SDO1Q07953 BTT1YDR252W 450 nt1.6□□□□□ -2.15
SDO1Q07953 FAR7YFR008W 666 nt1.6□□□□□ -2.15
SDO1Q07953 YGR018CYGR018C 330 nt1.6□□□□□ -2.15
SDO1Q07953 YHR073W-AYHR073W-A 177 nt1.6□□□□□ -2.15
SDO1Q07953 YMR052C-AYMR052C-A 366 nt1.6□□□□□ -2.15
SDO1Q07953 VMR1YHL035C 4779 nt1.6□□□□□ -2.15
SDO1Q07953 IRC10YOL015W 1761 nt1.59□□□□□ -2.15
SDO1Q07953 YDR115WYDR115W 318 nt1.59□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 19.9 ms