Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeastyeast

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM6Q06406 GPI8YDR331W 1236 nt0.7□□□□□ -2.3
LSM6Q06406 RPS26BYER131W 360 nt0.7□□□□□ -2.3
LSM6Q06406 YPT52YKR014C 705 nt0.7□□□□□ -2.3
LSM6Q06406 EAF7YNL136W 1278 nt0.7□□□□□ -2.3
LSM6Q06406 MFA2YNL145W 117 nt0.7□□□□□ -2.3
LSM6Q06406 SFM1YOR021C 642 nt0.7□□□□□ -2.3
LSM6Q06406 MSN5YDR335W 3675 nt0.69□□□□□ -2.3
LSM6Q06406 KAP122YGL016W 3246 nt0.69□□□□□ -2.3
LSM6Q06406 DOP1YDR141C 5097 nt0.69□□□□□ -2.3
LSM6Q06406 YER091C-AYER091C-A 222 nt0.69□□□□□ -2.3
LSM6Q06406 MGE1YOR232W 687 nt0.69□□□□□ -2.3
LSM6Q06406 YPR063CYPR063C 423 nt0.69□□□□□ -2.3
LSM6Q06406 IFH1YLR223C 3258 nt0.69□□□□□ -2.3
LSM6Q06406 TUS1YLR425W 3924 nt0.69□□□□□ -2.3
LSM6Q06406 YPD1YDL235C 504 nt0.68□□□□□ -2.3
LSM6Q06406 FAR7YFR008W 666 nt0.68□□□□□ -2.3
LSM6Q06406 ARG3YJL088W 1017 nt0.68□□□□□ -2.3
LSM6Q06406 BUD19YJL188C 309 nt0.68□□□□□ -2.3
LSM6Q06406 COF1YLL050C 432 nt0.68□□□□□ -2.3
LSM6Q06406 RRT16YNL105W 429 nt0.68□□□□□ -2.3
LSM6Q06406 MIX23YBL107C 591 nt0.68□□□□□ -2.3
LSM6Q06406 snR14snR14 160 nt0.68□□□□□ -2.3
LSM6Q06406 ARL3YPL051W 597 nt0.68□□□□□ -2.3
LSM6Q06406 YJL049WYJL049W 1353 nt0.68□□□□□ -2.3
LSM6Q06406 MPC54YOR177C 1395 nt0.68□□□□□ -2.3
LSM6Q06406 UFD2YDL190C 2886 nt0.67□□□□□ -2.3
LSM6Q06406 BFA1YJR053W 1725 nt0.67□□□□□ -2.3
LSM6Q06406 MSH3YCR092C 3057 nt0.67□□□□□ -2.3
LSM6Q06406 YGL006W-AYGL006W-A 111 nt0.67□□□□□ -2.3
LSM6Q06406 YGL177WYGL177W 348 nt0.67□□□□□ -2.3
LSM6Q06406 YJL119CYJL119C 324 nt0.67□□□□□ -2.3
LSM6Q06406 FIP1YJR093C 984 nt0.67□□□□□ -2.3
LSM6Q06406 CSI2YOL007C 1026 nt0.67□□□□□ -2.3
LSM6Q06406 ERP4YOR016C 624 nt0.67□□□□□ -2.3
LSM6Q06406 MVP1YMR004W 1536 nt0.67□□□□□ -2.3
LSM6Q06406 PLP1YDR183W 693 nt0.66□□□□□ -2.3
LSM6Q06406 YIR023C-AYIR023C-A 324 nt0.66□□□□□ -2.3
LSM6Q06406 VPS55YJR044C 423 nt0.66□□□□□ -2.3
LSM6Q06406 ECI1YLR284C 843 nt0.66□□□□□ -2.3
LSM6Q06406 SNC2YOR327C 348 nt0.66□□□□□ -2.3
LSM6Q06406 SIP4YJL089W 2490 nt0.66□□□□□ -2.3
LSM6Q06406 NUP192YJL039C 5052 nt0.66□□□□□ -2.3
LSM6Q06406 YDR210W-AYDR210W-A 1317 nt0.65□□□□□ -2.3
LSM6Q06406 YOR343W-AYOR343W-A 1317 nt0.65□□□□□ -2.3
LSM6Q06406 VPS54YDR027C 2670 nt0.65□□□□□ -2.3
LSM6Q06406 NSE4YDL105W 1209 nt0.65□□□□□ -2.31
LSM6Q06406 YIL102C-AYIL102C-A 228 nt0.65□□□□□ -2.31
LSM6Q06406 ICY1YMR195W 384 nt0.65□□□□□ -2.31
LSM6Q06406 TEX1YNL253W 1269 nt0.65□□□□□ -2.31
LSM6Q06406 GRX7YBR014C 612 nt0.65□□□□□ -2.31
LSM6Q06406 RPN8YOR261C 1017 nt0.65□□□□□ -2.31
LSM6Q06406 VPS28YPL065W 729 nt0.65□□□□□ -2.31
LSM6Q06406 BUD3YCL014W 4911 nt0.65□□□□□ -2.31
LSM6Q06406 SEF1YBL066C 3447 nt0.65□□□□□ -2.31
LSM6Q06406 TRM732YMR259C 4263 nt0.64□□□□□ -2.31
LSM6Q06406 YDL157CYDL157C 357 nt0.64□□□□□ -2.31
LSM6Q06406 YDR199WYDR199W 366 nt0.64□□□□□ -2.31
LSM6Q06406 HSK3YKL138C-A 210 nt0.64□□□□□ -2.31
LSM6Q06406 YOL050CYOL050C 321 nt0.64□□□□□ -2.31
LSM6Q06406 CIN2YPL241C 807 nt0.64□□□□□ -2.31
LSM6Q06406 NCL1YBL024W 2055 nt0.64□□□□□ -2.31
LSM6Q06406 SLK19YOR195W 2466 nt0.64□□□□□ -2.31
LSM6Q06406 DGR2YKL121W 2559 nt0.64□□□□□ -2.31
LSM6Q06406 ROM2YLR371W 4071 nt0.64□□□□□ -2.31
LSM6Q06406 EAF1YDR359C 2949 nt0.63□□□□□ -2.31
LSM6Q06406 YCR090CYCR090C 549 nt0.63□□□□□ -2.31
LSM6Q06406 LSM6YDR378C 261 nt0.63□□□□□ -2.31
LSM6Q06406 YDR537CYDR537C 606 nt0.63□□□□□ -2.31
LSM6Q06406 tV(UAC)BtV(UAC)B 74 nt0.63□□□□□ -2.31
LSM6Q06406 tV(UAC)DtV(UAC)D 74 nt0.63□□□□□ -2.31
LSM6Q06406 DLT1YMR126C 1029 nt0.63□□□□□ -2.31
LSM6Q06406 MUM2YBR057C 1101 nt0.63□□□□□ -2.31
LSM6Q06406 CUR1YPR158W 759 nt0.63□□□□□ -2.31
LSM6Q06406 YCL023CYCL023C 348 nt0.63□□□□□ -2.31
LSM6Q06406 ZRG17YNR039C 1818 nt0.63□□□□□ -2.31
LSM6Q06406 ZRG8YER033C 3231 nt0.63□□□□□ -2.31
LSM6Q06406 SNF5YBR289W 2718 nt0.63□□□□□ -2.31
LSM6Q06406 NUP188YML103C 4968 nt0.62□□□□□ -2.31
LSM6Q06406 snR63snR63 255 nt0.62□□□□□ -2.31
LSM6Q06406 YIP1YGR172C 747 nt0.62□□□□□ -2.31
LSM6Q06406 SEC28YIL076W 891 nt0.62□□□□□ -2.31
LSM6Q06406 RPI1YIL119C 1224 nt0.62□□□□□ -2.31
LSM6Q06406 YET1YKL065C 621 nt0.62□□□□□ -2.31
LSM6Q06406 YLR255CYLR255C 354 nt0.62□□□□□ -2.31
LSM6Q06406 OST2YOR103C 393 nt0.62□□□□□ -2.31
LSM6Q06406 YOR114WYOR114W 885 nt0.62□□□□□ -2.31
LSM6Q06406 PAU24YBR301W 363 nt0.62□□□□□ -2.31
LSM6Q06406 AEP1YMR064W 1557 nt0.62□□□□□ -2.31
LSM6Q06406 YGR250CYGR250C 2346 nt0.61□□□□□ -2.31
LSM6Q06406 SSF2YDR312W 1362 nt0.61□□□□□ -2.31
LSM6Q06406 DOT6YER088C 2013 nt0.61□□□□□ -2.31
LSM6Q06406 YDL025W-AYDL025W-A 105 nt0.61□□□□□ -2.31
LSM6Q06406 YGL014C-AYGL014C-A 162 nt0.61□□□□□ -2.31
LSM6Q06406 GIC1YHR061C 945 nt0.61□□□□□ -2.31
LSM6Q06406 YJL114WYJL114W 681 nt0.61□□□□□ -2.31
LSM6Q06406 LSM7YNL147W 348 nt0.61□□□□□ -2.31
LSM6Q06406 COA2YPL189C-A 207 nt0.61□□□□□ -2.31
LSM6Q06406 ECM25YJL201W 1800 nt0.61□□□□□ -2.31
LSM6Q06406 SFB2YNL049C 2631 nt0.6□□□□□ -2.31
LSM6Q06406 MUK1YPL070W 1839 nt0.6□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 20.2 ms