Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.94■□□□□ 0.33e-7■■■□□ 14.8
LSM11P83369 PRSS21-207ENST00000574813 873 ntTSL 316.56■□□□□ 0.244e-8■■■□□ 14.8
LSM11P83369 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.213e-7■■■□□ 14.8
LSM11P83369 NAA10-209ENST00000466877 1080 ntTSL 1 (best)15.54■□□□□ 0.086e-17■■■□□ 14.8
LSM11P83369 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.44■□□□□ 0.063e-7■■■□□ 14.8
LSM11P83369 NAA10-207ENST00000460996 908 ntTSL 215.37■□□□□ 0.056e-17■■■□□ 14.8
LSM11P83369 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.31■□□□□ 0.043e-7■■■□□ 14.8
LSM11P83369 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.023e-7■■■□□ 14.8
LSM11P83369 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.07■□□□□ 04e-8■■■□□ 14.8
LSM11P83369 RECQL4-208ENST00000534626 1165 ntTSL 514.61□□□□□ -0.073e-7■■■□□ 14.8
LSM11P83369 RPL22-203ENST00000465335 806 ntTSL 314.42□□□□□ -0.13e-7■■■□□ 14.8
LSM11P83369 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.06□□□□□ -0.162e-10■■■□□ 14.8
LSM11P83369 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.06□□□□□ -0.162e-10■■■□□ 14.8
LSM11P83369 NAA10-215ENST00000484950 873 ntTSL 213.76□□□□□ -0.216e-17■■■□□ 14.8
LSM11P83369 EML3-213ENST00000494448 3665 ntTSL 213.64□□□□□ -0.233e-7■■■□□ 14.8
LSM11P83369 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.47□□□□□ -0.256e-17■■■□□ 14.8
LSM11P83369 NAA10-202ENST00000370011 538 ntTSL 513.47□□□□□ -0.256e-17■■■□□ 14.8
LSM11P83369 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.47□□□□□ -0.256e-17■■■□□ 14.8
LSM11P83369 NAA10-214ENST00000482485 1075 ntTSL 213.37□□□□□ -0.276e-17■■■□□ 14.8
LSM11P83369 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.22□□□□□ -0.293e-7■■■□□ 14.8
LSM11P83369 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.95□□□□□ -0.343e-7■■■□□ 14.8
LSM11P83369 AGRN-203ENST00000461111 3385 ntTSL 1 (best)11.84□□□□□ -0.513e-7■■■□□ 14.8
LSM11P83369 PRSS21-206ENST00000574265 860 ntTSL 311.16□□□□□ -0.624e-8■■■□□ 14.8
LSM11P83369 NAA10-205ENST00000393712 908 ntTSL 5 BASIC11.02□□□□□ -0.656e-17■■■□□ 14.8
LSM11P83369 RPL22-205ENST00000471204 524 ntTSL 210.54□□□□□ -0.723e-7■■■□□ 14.8
LSM11P83369 KIF2C-202ENST00000372224 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.753e-7■■■□□ 14.8
LSM11P83369 KIF2C-201ENST00000372217 2955 ntTSL 1 (best) BASIC9.01□□□□□ -0.973e-7■■■□□ 14.8
LSM11P83369 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC9□□□□□ -0.972e-10■■■□□ 14.8
LSM11P83369 SNHG8-204ENST00000602573 570 ntTSL 28.26□□□□□ -1.092e-10■■■□□ 14.8
LSM11P83369 SNHG8-203ENST00000602520 327 ntTSL 28.05□□□□□ -1.122e-10■■■□□ 14.8
LSM11P83369 PRSS21-209ENST00000575739 378 ntTSL 37.83□□□□□ -1.164e-8■■■□□ 14.8
LSM11P83369 RNU6-13P-201ENST00000384248 107 ntBASIC6.46□□□□□ -1.383e-7■■■□□ 14.8
LSM11P83369 ACSS2-211ENST00000477932 2450 ntTSL 519.06■□□□□ 0.644e-9■■■□□ 14.8
LSM11P83369 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.97■□□□□ 0.314e-9■■■□□ 14.8
LSM11P83369 ACSS2-210ENST00000476922 1527 ntTSL 215.98■□□□□ 0.154e-9■■■□□ 14.8
LSM11P83369 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.094e-9■■■□□ 14.8
LSM11P83369 ACSS2-214ENST00000481284 2851 ntTSL 29.11□□□□□ -0.954e-9■■■□□ 14.8
LSM11P83369 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.097e-9■■■□□ 14.8
LSM11P83369 F7-206ENST00000541084 2873 ntTSL 2 BASIC11.12□□□□□ -0.637e-9■■■□□ 14.8
LSM11P83369 F7-202ENST00000375581 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.727e-9■■■□□ 14.8
LSM11P83369 SH3GLB2-208ENST00000455407 837 ntTSL 224.75■■□□□ 1.553e-7■■■□□ 14.8
LSM11P83369 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.271e-6■■■□□ 14.8
LSM11P83369 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.171e-6■■■□□ 14.8
LSM11P83369 SGSM2-204ENST00000572841 2450 ntTSL 215.25■□□□□ 0.031e-6■■■□□ 14.8
LSM11P83369 POLD1-202ENST00000593407 867 ntTSL 517.12■□□□□ 0.333e-6■■■□□ 14.8
LSM11P83369 POLD1-208ENST00000596648 1048 ntTSL 516.24■□□□□ 0.193e-6■■■□□ 14.8
LSM11P83369 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.165e-12■■■□□ 14.8
LSM11P83369 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.83e-7■■■□□ 14.8
LSM11P83369 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.343e-7■■■□□ 14.8
LSM11P83369 STK11-207ENST00000589152 3365 ntTSL 214.24□□□□□ -0.133e-7■■■□□ 14.8
LSM11P83369 STK11-202ENST00000585465 3554 ntTSL 512.97□□□□□ -0.333e-7■■■□□ 14.8
LSM11P83369 PSME2-212ENST00000560370 620 ntTSL 314.59□□□□□ -0.073e-8■■■□□ 14.7
LSM11P83369 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.495e-8■■■□□ 14.7
LSM11P83369 RHOT2-222ENST00000569675 2559 ntTSL 217.16■□□□□ 0.345e-8■■■□□ 14.7
LSM11P83369 RHOT2-218ENST00000568636 3098 ntTSL 215.88■□□□□ 0.135e-8■■■□□ 14.7
LSM11P83369 RHOT2-220ENST00000569197 530 ntTSL 510.58□□□□□ -0.725e-8■■■□□ 14.7
LSM11P83369 AC092127.1-201ENST00000567093 3455 ntBASIC14.79□□□□□ -0.042e-7■■■□□ 14.7
LSM11P83369 ACTB-213ENST00000493945 1236 ntTSL 513.28□□□□□ -0.283e-18■■■□□ 14.7
LSM11P83369 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.97e-12■■■□□ 14.7
LSM11P83369 MVD-209ENST00000565149 2352 ntTSL 1 (best)18.2■□□□□ 0.57e-12■■■□□ 14.7
LSM11P83369 ANO9-208ENST00000534161 2158 ntTSL 215.73■□□□□ 0.114e-7■■■□□ 14.7
LSM11P83369 ANO9-205ENST00000526142 2868 ntTSL 215.42■□□□□ 0.064e-7■■■□□ 14.7
LSM11P83369 ANO9-207ENST00000532094 5487 ntTSL 215.04■□□□□ -04e-7■■■□□ 14.7
LSM11P83369 MMS19-215ENST00000478452 835 ntTSL 27.71□□□□□ -1.183e-6■■■□□ 14.7
LSM11P83369 NBEAL2-210ENST00000477412 827 ntTSL 213.84□□□□□ -0.195e-9■■■□□ 14.6
LSM11P83369 NBEAL2-207ENST00000469349 540 ntTSL 212.7□□□□□ -0.385e-9■■■□□ 14.6
LSM11P83369 MTA1-220ENST00000552286 1943 ntTSL 218.26■□□□□ 0.514e-8■■■□□ 14.6
LSM11P83369 MTA1-208ENST00000438610 2144 ntTSL 1 (best)16.99■□□□□ 0.314e-8■■■□□ 14.6
LSM11P83369 MTA1-206ENST00000434050 2050 ntTSL 1 (best)16.8■□□□□ 0.284e-8■■■□□ 14.6
LSM11P83369 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.72■□□□□ 0.274e-8■■■□□ 14.6
LSM11P83369 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.41■□□□□ 0.224e-8■■■□□ 14.6
LSM11P83369 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.77□□□□□ -0.054e-8■■■□□ 14.6
LSM11P83369 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.184e-8■■■□□ 14.6
LSM11P83369 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.12e-6■■■□□ 14.6
LSM11P83369 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.025e-6■■■□□ 14.6
LSM11P83369 SETD5-203ENST00000402198 6827 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.898e-10■■■□□ 14.6
LSM11P83369 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.248e-10■■■□□ 14.6
LSM11P83369 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC7.25□□□□□ -1.258e-10■■■□□ 14.6
LSM11P83369 SETD5-202ENST00000399686 3362 ntTSL 56.84□□□□□ -1.318e-10■■■□□ 14.6
LSM11P83369 DAZAP1-203ENST00000585485 3943 ntTSL 211.86□□□□□ -0.517e-7■■■□□ 14.6
LSM11P83369 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.41e-7■■■□□ 14.6
LSM11P83369 TTLL3-224ENST00000471058 543 ntTSL 29.15□□□□□ -0.942e-7■■■□□ 14.6
LSM11P83369 PIEZO1-203ENST00000419505 1635 ntTSL 1 (best)17.81■□□□□ 0.448e-10■■■□□ 14.6
LSM11P83369 PIEZO1-208ENST00000484567 2464 ntTSL 216.7■□□□□ 0.268e-10■■■□□ 14.6
LSM11P83369 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.16■□□□□ 0.188e-10■■■□□ 14.6
LSM11P83369 PIEZO1-214ENST00000521877 686 ntTSL 215.17■□□□□ 0.028e-10■■■□□ 14.6
LSM11P83369 PIEZO1-213ENST00000518793 660 ntTSL 310.35□□□□□ -0.758e-10■■■□□ 14.6
LSM11P83369 ILF3-219ENST00000590261 3219 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.592e-7■■■□□ 14.6
LSM11P83369 ILF3-208ENST00000587928 4230 ntTSL 210.15□□□□□ -0.792e-7■■■□□ 14.6
LSM11P83369 SKIV2L-209ENST00000483553 1307 ntTSL 514.24□□□□□ -0.131e-9■■■□□ 14.6
LSM11P83369 SKIV2L-207ENST00000471818 706 ntTSL 514□□□□□ -0.171e-9■■■□□ 14.6
LSM11P83369 SKIV2L-204ENST00000465703 4507 ntTSL 1 (best)13.47□□□□□ -0.251e-9■■■□□ 14.6
LSM11P83369 SKIV2L-206ENST00000470453 455 ntTSL 313.3□□□□□ -0.281e-9■■■□□ 14.6
LSM11P83369 SKIV2L-213ENST00000491994 866 ntTSL 213.23□□□□□ -0.291e-9■■■□□ 14.6
LSM11P83369 SKIV2L-208ENST00000474839 3378 ntTSL 211.54□□□□□ -0.561e-9■■■□□ 14.6
LSM11P83369 SKIV2L-201ENST00000375394 3894 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.741e-9■■■□□ 14.6
LSM11P83369 DDX42-214ENST00000581767 2244 nt7.44□□□□□ -1.224e-8■■■□□ 14.6
LSM11P83369 ARHGAP4-223ENST00000494397 1752 ntTSL 520.88■□□□□ 0.933e-6■■■□□ 14.6
LSM11P83369 ARHGAP4-222ENST00000494302 2667 ntTSL 516.93■□□□□ 0.33e-6■■■□□ 14.6
LSM11P83369 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.47■□□□□ 0.233e-6■■■□□ 14.6
Retrieved 100 of 11,495 protein–RNA pairs in 84.6 ms