Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CLDN2P57739 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.27■□□□□ 0.84
CLDN2P57739 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.27■□□□□ 0.84
CLDN2P57739 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN2P57739 SOX15-203ENST00000570788 1093 ntBASIC20.27■□□□□ 0.84
CLDN2P57739 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.27■□□□□ 0.84
CLDN2P57739 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CLDN2P57739 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CLDN2P57739 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN2P57739 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN2P57739 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CLDN2P57739 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN2P57739 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN2P57739 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.26■□□□□ 0.83
CLDN2P57739 LINC00565-201ENST00000562710 2331 ntBASIC20.26■□□□□ 0.83
CLDN2P57739 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN2P57739 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN2P57739 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CLDN2P57739 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN2P57739 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN2P57739 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN2P57739 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN2P57739 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN2P57739 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.26■□□□□ 0.83
CLDN2P57739 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.26■□□□□ 0.83
CLDN2P57739 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CLDN2P57739 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.26■□□□□ 0.83
CLDN2P57739 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN2P57739 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.26■□□□□ 0.83
CLDN2P57739 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN2P57739 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN2P57739 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN2P57739 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN2P57739 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.25■□□□□ 0.83
CLDN2P57739 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN2P57739 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN2P57739 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CLDN2P57739 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.25■□□□□ 0.83
CLDN2P57739 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN2P57739 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CLDN2P57739 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN2P57739 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CLDN2P57739 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN2P57739 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDN2P57739 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDN2P57739 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN2P57739 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
CLDN2P57739 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN2P57739 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CLDN2P57739 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN2P57739 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN2P57739 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN2P57739 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN2P57739 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.24■□□□□ 0.83
CLDN2P57739 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN2P57739 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.24■□□□□ 0.83
CLDN2P57739 AC233263.1-201ENST00000578059 224 ntBASIC20.24■□□□□ 0.83
CLDN2P57739 AL356652.1-201ENST00000615962 565 ntBASIC20.24■□□□□ 0.83
CLDN2P57739 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.23■□□□□ 0.83
CLDN2P57739 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN2P57739 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
CLDN2P57739 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN2P57739 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CLDN2P57739 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.23■□□□□ 0.83
CLDN2P57739 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN2P57739 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN2P57739 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.23■□□□□ 0.83
CLDN2P57739 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.23■□□□□ 0.83
CLDN2P57739 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.23■□□□□ 0.83
CLDN2P57739 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN2P57739 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.23■□□□□ 0.83
CLDN2P57739 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.23■□□□□ 0.83
CLDN2P57739 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN2P57739 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CLDN2P57739 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CLDN2P57739 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN2P57739 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN2P57739 AL024507.2-201ENST00000606070 2574 ntBASIC20.22■□□□□ 0.83
CLDN2P57739 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN2P57739 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN2P57739 PGM5P4-201ENST00000421970 445 ntBASIC20.22■□□□□ 0.83
CLDN2P57739 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN2P57739 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.22■□□□□ 0.83
CLDN2P57739 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.22■□□□□ 0.83
CLDN2P57739 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CLDN2P57739 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN2P57739 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.22■□□□□ 0.83
CLDN2P57739 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN2P57739 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN2P57739 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN2P57739 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CLDN2P57739 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN2P57739 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN2P57739 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.21■□□□□ 0.83
CLDN2P57739 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN2P57739 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN2P57739 KRT17P3-201ENST00000420566 1262 ntBASIC20.21■□□□□ 0.83
CLDN2P57739 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CLDN2P57739 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.21■□□□□ 0.83
CLDN2P57739 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms