Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CLDN12P56749 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN12P56749 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN12P56749 AC133561.4-201ENST00000566112 224 ntBASIC17.76■□□□□ 0.43
CLDN12P56749 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.76■□□□□ 0.43
CLDN12P56749 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN12P56749 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN12P56749 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN12P56749 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CLDN12P56749 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CLDN12P56749 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.75■□□□□ 0.43
CLDN12P56749 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
CLDN12P56749 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CLDN12P56749 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN12P56749 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN12P56749 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CLDN12P56749 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CLDN12P56749 AC092720.2-201ENST00000602388 1665 ntBASIC17.75■□□□□ 0.43
CLDN12P56749 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CLDN12P56749 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN12P56749 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN12P56749 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN12P56749 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.75■□□□□ 0.43
CLDN12P56749 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.75■□□□□ 0.43
CLDN12P56749 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN12P56749 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.75■□□□□ 0.43
CLDN12P56749 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN12P56749 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.75■□□□□ 0.43
CLDN12P56749 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN12P56749 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN12P56749 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN12P56749 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CLDN12P56749 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
CLDN12P56749 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN12P56749 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN12P56749 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN12P56749 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN12P56749 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN12P56749 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CLDN12P56749 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN12P56749 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CLDN12P56749 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.74■□□□□ 0.43
CLDN12P56749 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CLDN12P56749 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CLDN12P56749 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.74■□□□□ 0.43
CLDN12P56749 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.74■□□□□ 0.43
CLDN12P56749 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.74■□□□□ 0.43
CLDN12P56749 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.74■□□□□ 0.43
CLDN12P56749 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN12P56749 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.74■□□□□ 0.43
CLDN12P56749 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.74■□□□□ 0.43
CLDN12P56749 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN12P56749 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.74■□□□□ 0.43
CLDN12P56749 AL158211.5-201ENST00000623583 2518 ntBASIC17.74■□□□□ 0.43
CLDN12P56749 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN12P56749 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN12P56749 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN12P56749 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.74■□□□□ 0.43
CLDN12P56749 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN12P56749 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN12P56749 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN12P56749 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CLDN12P56749 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CLDN12P56749 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CLDN12P56749 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN12P56749 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN12P56749 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN12P56749 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN12P56749 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN12P56749 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CLDN12P56749 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN12P56749 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN12P56749 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN12P56749 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
CLDN12P56749 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CLDN12P56749 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN12P56749 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CLDN12P56749 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.73■□□□□ 0.43
CLDN12P56749 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.73■□□□□ 0.43
CLDN12P56749 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.73■□□□□ 0.43
CLDN12P56749 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.73■□□□□ 0.43
CLDN12P56749 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CLDN12P56749 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.73■□□□□ 0.43
CLDN12P56749 AC125437.2-201ENST00000625180 2167 ntBASIC17.73■□□□□ 0.43
CLDN12P56749 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN12P56749 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
CLDN12P56749 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN12P56749 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.72■□□□□ 0.43
CLDN12P56749 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN12P56749 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CLDN12P56749 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDN12P56749 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CLDN12P56749 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDN12P56749 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN12P56749 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN12P56749 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN12P56749 AC005224.4-201ENST00000583262 1652 ntBASIC17.72■□□□□ 0.43
CLDN12P56749 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDN12P56749 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN12P56749 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms