Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PSMD4P55036 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PSMD4P55036 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PSMD4P55036 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
PSMD4P55036 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.01■□□□□ 0.63
PSMD4P55036 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PSMD4P55036 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PSMD4P55036 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PSMD4P55036 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PSMD4P55036 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PSMD4P55036 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
PSMD4P55036 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PSMD4P55036 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.01■□□□□ 0.63
PSMD4P55036 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PSMD4P55036 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PSMD4P55036 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
PSMD4P55036 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PSMD4P55036 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PSMD4P55036 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.01■□□□□ 0.63
PSMD4P55036 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PSMD4P55036 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19■□□□□ 0.63
PSMD4P55036 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PSMD4P55036 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19■□□□□ 0.63
PSMD4P55036 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19■□□□□ 0.63
PSMD4P55036 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19■□□□□ 0.63
PSMD4P55036 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19■□□□□ 0.63
PSMD4P55036 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PSMD4P55036 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PSMD4P55036 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PSMD4P55036 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19■□□□□ 0.63
PSMD4P55036 DUX4L16-201ENST00000555130 1264 ntBASIC19■□□□□ 0.63
PSMD4P55036 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19■□□□□ 0.63
PSMD4P55036 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19■□□□□ 0.63
PSMD4P55036 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19■□□□□ 0.63
PSMD4P55036 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PSMD4P55036 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PSMD4P55036 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19■□□□□ 0.63
PSMD4P55036 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
PSMD4P55036 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19■□□□□ 0.63
PSMD4P55036 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PSMD4P55036 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PSMD4P55036 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PSMD4P55036 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19■□□□□ 0.63
PSMD4P55036 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19■□□□□ 0.63
PSMD4P55036 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PSMD4P55036 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PSMD4P55036 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PSMD4P55036 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PSMD4P55036 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PSMD4P55036 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PSMD4P55036 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PSMD4P55036 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.99■□□□□ 0.63
PSMD4P55036 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PSMD4P55036 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PSMD4P55036 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.99■□□□□ 0.63
PSMD4P55036 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.99■□□□□ 0.63
PSMD4P55036 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.99■□□□□ 0.63
PSMD4P55036 AC007322.1-201ENST00000426983 750 ntBASIC18.99■□□□□ 0.63
PSMD4P55036 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.99■□□□□ 0.63
PSMD4P55036 FAM21FP-204ENST00000608637 956 ntBASIC18.99■□□□□ 0.63
PSMD4P55036 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PSMD4P55036 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PSMD4P55036 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PSMD4P55036 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PSMD4P55036 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PSMD4P55036 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PSMD4P55036 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PSMD4P55036 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PSMD4P55036 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PSMD4P55036 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.98■□□□□ 0.63
PSMD4P55036 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PSMD4P55036 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PSMD4P55036 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.98■□□□□ 0.63
PSMD4P55036 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.98■□□□□ 0.63
PSMD4P55036 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.98■□□□□ 0.63
PSMD4P55036 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PSMD4P55036 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.98■□□□□ 0.63
PSMD4P55036 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PSMD4P55036 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.98■□□□□ 0.63
PSMD4P55036 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.97■□□□□ 0.63
PSMD4P55036 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PSMD4P55036 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PSMD4P55036 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PSMD4P55036 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
PSMD4P55036 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PSMD4P55036 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PSMD4P55036 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PSMD4P55036 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PSMD4P55036 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PSMD4P55036 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PSMD4P55036 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.97■□□□□ 0.63
PSMD4P55036 AC004911.1-201ENST00000416316 871 ntBASIC18.97■□□□□ 0.63
PSMD4P55036 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PSMD4P55036 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.97■□□□□ 0.63
PSMD4P55036 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.97■□□□□ 0.63
PSMD4P55036 IKBKGP1-201ENST00000612193 1073 ntBASIC18.97■□□□□ 0.63
PSMD4P55036 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.97■□□□□ 0.63
PSMD4P55036 AC008694.1-202ENST00000636953 945 ntBASIC18.97■□□□□ 0.63
PSMD4P55036 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PSMD4P55036 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms