Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SOX6P35712 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SOX6P35712 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SOX6P35712 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.32■□□□□ 0.52
SOX6P35712 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.32■□□□□ 0.52
SOX6P35712 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SOX6P35712 FP700111.2-201ENST00000619190 1892 ntBASIC18.32■□□□□ 0.52
SOX6P35712 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.32■□□□□ 0.52
SOX6P35712 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SOX6P35712 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SOX6P35712 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SOX6P35712 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
SOX6P35712 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.32■□□□□ 0.52
SOX6P35712 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SOX6P35712 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SOX6P35712 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SOX6P35712 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SOX6P35712 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.31■□□□□ 0.52
SOX6P35712 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SOX6P35712 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SOX6P35712 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SOX6P35712 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SOX6P35712 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SOX6P35712 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.31■□□□□ 0.52
SOX6P35712 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SOX6P35712 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SOX6P35712 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SOX6P35712 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SOX6P35712 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SOX6P35712 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.31■□□□□ 0.52
SOX6P35712 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
SOX6P35712 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SOX6P35712 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SOX6P35712 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SOX6P35712 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SOX6P35712 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX6P35712 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
SOX6P35712 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.3■□□□□ 0.52
SOX6P35712 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX6P35712 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX6P35712 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SOX6P35712 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SOX6P35712 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SOX6P35712 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SOX6P35712 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX6P35712 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX6P35712 TCF3P1-201ENST00000423021 1937 ntBASIC18.3■□□□□ 0.52
SOX6P35712 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.3■□□□□ 0.52
SOX6P35712 MIR4787-201ENST00000607364 84 ntBASIC18.3■□□□□ 0.52
SOX6P35712 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.3■□□□□ 0.52
SOX6P35712 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX6P35712 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.3■□□□□ 0.52
SOX6P35712 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.3■□□□□ 0.52
SOX6P35712 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SOX6P35712 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SOX6P35712 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX6P35712 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX6P35712 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX6P35712 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX6P35712 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX6P35712 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX6P35712 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX6P35712 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SOX6P35712 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SOX6P35712 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SOX6P35712 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX6P35712 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SOX6P35712 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX6P35712 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX6P35712 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX6P35712 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SOX6P35712 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX6P35712 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SOX6P35712 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX6P35712 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SOX6P35712 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX6P35712 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SOX6P35712 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.29■□□□□ 0.52
SOX6P35712 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX6P35712 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.29■□□□□ 0.52
SOX6P35712 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX6P35712 AC068587.7-201ENST00000641602 218 ntBASIC18.29■□□□□ 0.52
SOX6P35712 AC009102.2-201ENST00000606772 1639 ntBASIC18.29■□□□□ 0.52
SOX6P35712 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX6P35712 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SOX6P35712 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX6P35712 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SOX6P35712 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX6P35712 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX6P35712 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX6P35712 AP004607.7-201ENST00000527152 1677 ntBASIC18.28■□□□□ 0.52
SOX6P35712 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SOX6P35712 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SOX6P35712 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SOX6P35712 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.28■□□□□ 0.52
SOX6P35712 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX6P35712 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX6P35712 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SOX6P35712 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX6P35712 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms