Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRPRAP08240 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRPRAP08240 AP003097.1-201ENST00000530657 1135 ntBASIC20.73■□□□□ 0.91
SRPRAP08240 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.73■□□□□ 0.91
SRPRAP08240 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.73■□□□□ 0.91
SRPRAP08240 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.73■□□□□ 0.91
SRPRAP08240 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.73■□□□□ 0.91
SRPRAP08240 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SRPRAP08240 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SRPRAP08240 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRPRAP08240 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRPRAP08240 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRPRAP08240 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.73■□□□□ 0.91
SRPRAP08240 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRPRAP08240 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRPRAP08240 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SRPRAP08240 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRPRAP08240 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SRPRAP08240 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRPRAP08240 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SRPRAP08240 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.72■□□□□ 0.91
SRPRAP08240 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.72■□□□□ 0.91
SRPRAP08240 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRPRAP08240 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SRPRAP08240 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRPRAP08240 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SRPRAP08240 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRPRAP08240 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
SRPRAP08240 AC027702.1-201ENST00000563810 1770 ntBASIC20.72■□□□□ 0.91
SRPRAP08240 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SRPRAP08240 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRPRAP08240 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SRPRAP08240 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.71■□□□□ 0.91
SRPRAP08240 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SRPRAP08240 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRPRAP08240 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SRPRAP08240 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRPRAP08240 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SRPRAP08240 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRPRAP08240 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SRPRAP08240 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.71■□□□□ 0.91
SRPRAP08240 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.71■□□□□ 0.91
SRPRAP08240 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.71■□□□□ 0.91
SRPRAP08240 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRPRAP08240 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.71■□□□□ 0.91
SRPRAP08240 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SRPRAP08240 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRPRAP08240 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRPRAP08240 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.71■□□□□ 0.91
SRPRAP08240 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRPRAP08240 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
SRPRAP08240 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRPRAP08240 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SRPRAP08240 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRPRAP08240 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SRPRAP08240 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRPRAP08240 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SRPRAP08240 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRPRAP08240 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRPRAP08240 CLDN5-201ENST00000403084 2357 ntBASIC20.7■□□□□ 0.9
SRPRAP08240 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.7■□□□□ 0.9
SRPRAP08240 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRPRAP08240 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SRPRAP08240 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SRPRAP08240 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.7■□□□□ 0.9
SRPRAP08240 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SRPRAP08240 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SRPRAP08240 AC006058.3-201ENST00000606217 1069 ntBASIC20.7■□□□□ 0.9
SRPRAP08240 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRPRAP08240 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRPRAP08240 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SRPRAP08240 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRPRAP08240 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRPRAP08240 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SRPRAP08240 AC121338.2-201ENST00000622535 1744 ntBASIC20.7■□□□□ 0.9
SRPRAP08240 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRPRAP08240 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SRPRAP08240 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SRPRAP08240 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SRPRAP08240 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRPRAP08240 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRPRAP08240 PRORSD1P-201ENST00000295112 541 ntBASIC20.69■□□□□ 0.9
SRPRAP08240 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRPRAP08240 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.69■□□□□ 0.9
SRPRAP08240 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SRPRAP08240 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.69■□□□□ 0.9
SRPRAP08240 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.69■□□□□ 0.9
SRPRAP08240 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
SRPRAP08240 UNC93B4-201ENST00000505679 747 ntBASIC20.69■□□□□ 0.9
SRPRAP08240 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.69■□□□□ 0.9
SRPRAP08240 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.69■□□□□ 0.9
SRPRAP08240 AC008403.3-201ENST00000598924 454 ntBASIC20.69■□□□□ 0.9
SRPRAP08240 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRPRAP08240 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRPRAP08240 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRPRAP08240 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SRPRAP08240 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
SRPRAP08240 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.68■□□□□ 0.9
SRPRAP08240 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
SRPRAP08240 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms