Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CTSDP07339 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.97■□□□□ 0.31
CTSDP07339 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTSDP07339 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CTSDP07339 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
CTSDP07339 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTSDP07339 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.97■□□□□ 0.31
CTSDP07339 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CTSDP07339 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.97■□□□□ 0.31
CTSDP07339 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.97■□□□□ 0.31
CTSDP07339 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTSDP07339 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTSDP07339 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTSDP07339 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.97■□□□□ 0.31
CTSDP07339 AC005224.4-201ENST00000583262 1652 ntBASIC16.97■□□□□ 0.31
CTSDP07339 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
CTSDP07339 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTSDP07339 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTSDP07339 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.96■□□□□ 0.31
CTSDP07339 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CTSDP07339 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CTSDP07339 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.96■□□□□ 0.31
CTSDP07339 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTSDP07339 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTSDP07339 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTSDP07339 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.96■□□□□ 0.31
CTSDP07339 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTSDP07339 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.96■□□□□ 0.31
CTSDP07339 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.96■□□□□ 0.31
CTSDP07339 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.96■□□□□ 0.31
CTSDP07339 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.96■□□□□ 0.31
CTSDP07339 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTSDP07339 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CTSDP07339 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CTSDP07339 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTSDP07339 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CTSDP07339 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.95■□□□□ 0.3
CTSDP07339 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTSDP07339 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTSDP07339 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CTSDP07339 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTSDP07339 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTSDP07339 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.95■□□□□ 0.3
CTSDP07339 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTSDP07339 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.95■□□□□ 0.3
CTSDP07339 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC16.95■□□□□ 0.3
CTSDP07339 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.95■□□□□ 0.3
CTSDP07339 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.95■□□□□ 0.3
CTSDP07339 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CTSDP07339 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.95■□□□□ 0.3
CTSDP07339 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTSDP07339 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTSDP07339 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTSDP07339 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.95■□□□□ 0.3
CTSDP07339 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSDP07339 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSDP07339 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CTSDP07339 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.94■□□□□ 0.3
CTSDP07339 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSDP07339 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.94■□□□□ 0.3
CTSDP07339 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTSDP07339 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.94■□□□□ 0.3
CTSDP07339 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSDP07339 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSDP07339 BX842568.3-201ENST00000418104 571 ntBASIC16.94■□□□□ 0.3
CTSDP07339 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.94■□□□□ 0.3
CTSDP07339 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.94■□□□□ 0.3
CTSDP07339 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTSDP07339 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.94■□□□□ 0.3
CTSDP07339 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.94■□□□□ 0.3
CTSDP07339 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSDP07339 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC16.94■□□□□ 0.3
CTSDP07339 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSDP07339 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSDP07339 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSDP07339 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.94■□□□□ 0.3
CTSDP07339 AC125437.2-201ENST00000625180 2167 ntBASIC16.94■□□□□ 0.3
CTSDP07339 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTSDP07339 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSDP07339 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.93■□□□□ 0.3
CTSDP07339 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSDP07339 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.93■□□□□ 0.3
CTSDP07339 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTSDP07339 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CTSDP07339 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSDP07339 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.93■□□□□ 0.3
CTSDP07339 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.93■□□□□ 0.3
CTSDP07339 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTSDP07339 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSDP07339 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSDP07339 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTSDP07339 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CTSDP07339 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CTSDP07339 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTSDP07339 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSDP07339 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTSDP07339 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.93■□□□□ 0.3
CTSDP07339 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CTSDP07339 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTSDP07339 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms