Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN1O95832 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.28■□□□□ 0.52
CLDN1O95832 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CLDN1O95832 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN1O95832 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CLDN1O95832 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN1O95832 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN1O95832 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CLDN1O95832 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN1O95832 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
CLDN1O95832 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN1O95832 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN1O95832 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN1O95832 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN1O95832 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN1O95832 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN1O95832 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.27■□□□□ 0.52
CLDN1O95832 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.27■□□□□ 0.52
CLDN1O95832 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
CLDN1O95832 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.27■□□□□ 0.52
CLDN1O95832 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
CLDN1O95832 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CLDN1O95832 AC124016.1-201ENST00000609552 612 ntBASIC18.27■□□□□ 0.52
CLDN1O95832 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
CLDN1O95832 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
CLDN1O95832 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN1O95832 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.27■□□□□ 0.51
CLDN1O95832 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.27■□□□□ 0.51
CLDN1O95832 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN1O95832 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN1O95832 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN1O95832 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN1O95832 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN1O95832 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CLDN1O95832 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN1O95832 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN1O95832 MCRIP2P1-201ENST00000394346 511 ntBASIC18.26■□□□□ 0.51
CLDN1O95832 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN1O95832 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.26■□□□□ 0.51
CLDN1O95832 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.26■□□□□ 0.51
CLDN1O95832 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.26■□□□□ 0.51
CLDN1O95832 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN1O95832 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.26■□□□□ 0.51
CLDN1O95832 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CLDN1O95832 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CLDN1O95832 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN1O95832 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN1O95832 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN1O95832 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN1O95832 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN1O95832 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN1O95832 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN1O95832 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN1O95832 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN1O95832 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN1O95832 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN1O95832 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN1O95832 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN1O95832 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN1O95832 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CLDN1O95832 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN1O95832 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN1O95832 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN1O95832 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CLDN1O95832 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN1O95832 AC091799.1-201ENST00000422823 811 ntBASIC18.25■□□□□ 0.51
CLDN1O95832 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.25■□□□□ 0.51
CLDN1O95832 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN1O95832 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.25■□□□□ 0.51
CLDN1O95832 AL049597.2-201ENST00000565575 961 ntBASIC18.25■□□□□ 0.51
CLDN1O95832 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.25■□□□□ 0.51
CLDN1O95832 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
CLDN1O95832 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN1O95832 MTDHP1-201ENST00000605323 784 ntBASIC18.25■□□□□ 0.51
CLDN1O95832 AL023875.1-201ENST00000640777 796 ntBASIC18.25■□□□□ 0.51
CLDN1O95832 ECEL1P1-201ENST00000373592 1742 ntBASIC18.25■□□□□ 0.51
CLDN1O95832 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN1O95832 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN1O95832 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN1O95832 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN1O95832 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.24■□□□□ 0.51
CLDN1O95832 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN1O95832 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CLDN1O95832 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
CLDN1O95832 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN1O95832 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN1O95832 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN1O95832 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN1O95832 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CLDN1O95832 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CLDN1O95832 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.24■□□□□ 0.51
CLDN1O95832 AC133681.1-201ENST00000465482 601 ntBASIC18.24■□□□□ 0.51
CLDN1O95832 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CLDN1O95832 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.24■□□□□ 0.51
CLDN1O95832 AL590326.2-201ENST00000625139 305 ntBASIC18.24■□□□□ 0.51
CLDN1O95832 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN1O95832 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.24■□□□□ 0.51
CLDN1O95832 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN1O95832 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN1O95832 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms