Protein–RNA interactions for Protein: O95460

MATN4, Matrilin-4, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATN4O95460 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.16■□□□□ 0.82
MATN4O95460 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.16■□□□□ 0.82
MATN4O95460 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
MATN4O95460 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
MATN4O95460 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
MATN4O95460 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MATN4O95460 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
MATN4O95460 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MATN4O95460 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.15■□□□□ 0.82
MATN4O95460 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
MATN4O95460 AL121603.2-201ENST00000557373 2117 ntBASIC20.15■□□□□ 0.82
MATN4O95460 AC092667.1-201ENST00000434301 2586 ntBASIC20.15■□□□□ 0.82
MATN4O95460 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
MATN4O95460 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MATN4O95460 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.15■□□□□ 0.82
MATN4O95460 CNN2P6-201ENST00000439038 900 ntBASIC20.15■□□□□ 0.82
MATN4O95460 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.15■□□□□ 0.82
MATN4O95460 AL162412.1-201ENST00000567129 965 ntBASIC20.15■□□□□ 0.82
MATN4O95460 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.15■□□□□ 0.82
MATN4O95460 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.15■□□□□ 0.82
MATN4O95460 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MATN4O95460 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
MATN4O95460 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MATN4O95460 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.15■□□□□ 0.82
MATN4O95460 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MATN4O95460 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MATN4O95460 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MATN4O95460 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MATN4O95460 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.14■□□□□ 0.82
MATN4O95460 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
MATN4O95460 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
MATN4O95460 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
MATN4O95460 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MATN4O95460 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.14■□□□□ 0.81
MATN4O95460 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.14■□□□□ 0.81
MATN4O95460 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MATN4O95460 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
MATN4O95460 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.14■□□□□ 0.81
MATN4O95460 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
MATN4O95460 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
MATN4O95460 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.14■□□□□ 0.81
MATN4O95460 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.14■□□□□ 0.81
MATN4O95460 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MATN4O95460 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.14■□□□□ 0.81
MATN4O95460 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
MATN4O95460 AL591742.1-201ENST00000604433 565 ntBASIC20.14■□□□□ 0.81
MATN4O95460 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
MATN4O95460 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MATN4O95460 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
MATN4O95460 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
MATN4O95460 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
MATN4O95460 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MATN4O95460 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
MATN4O95460 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.13■□□□□ 0.81
MATN4O95460 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MATN4O95460 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.13■□□□□ 0.81
MATN4O95460 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
MATN4O95460 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
MATN4O95460 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MATN4O95460 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MATN4O95460 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
MATN4O95460 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
MATN4O95460 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
MATN4O95460 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MATN4O95460 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MATN4O95460 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
MATN4O95460 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MATN4O95460 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.13■□□□□ 0.81
MATN4O95460 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
MATN4O95460 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MATN4O95460 AL137784.2-201ENST00000607332 1000 ntBASIC20.13■□□□□ 0.81
MATN4O95460 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
MATN4O95460 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
MATN4O95460 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MATN4O95460 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MATN4O95460 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.13■□□□□ 0.81
MATN4O95460 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
MATN4O95460 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
MATN4O95460 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.12■□□□□ 0.81
MATN4O95460 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MATN4O95460 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MATN4O95460 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.12■□□□□ 0.81
MATN4O95460 AC007322.3-201ENST00000426526 701 ntBASIC20.12■□□□□ 0.81
MATN4O95460 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.12■□□□□ 0.81
MATN4O95460 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MATN4O95460 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.12■□□□□ 0.81
MATN4O95460 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.12■□□□□ 0.81
MATN4O95460 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.12■□□□□ 0.81
MATN4O95460 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.12■□□□□ 0.81
MATN4O95460 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MATN4O95460 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
MATN4O95460 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MATN4O95460 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.12■□□□□ 0.81
MATN4O95460 AC073314.1-201ENST00000568729 2216 ntBASIC20.12■□□□□ 0.81
MATN4O95460 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
MATN4O95460 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
MATN4O95460 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MATN4O95460 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MATN4O95460 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MATN4O95460 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms