Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
IDH3BO43837 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
IDH3BO43837 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IDH3BO43837 MIR939-201ENST00000401314 82 ntBASIC18.71■□□□□ 0.59
IDH3BO43837 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.71■□□□□ 0.59
IDH3BO43837 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IDH3BO43837 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
IDH3BO43837 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IDH3BO43837 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IDH3BO43837 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IDH3BO43837 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.71■□□□□ 0.59
IDH3BO43837 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.71■□□□□ 0.59
IDH3BO43837 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
IDH3BO43837 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
IDH3BO43837 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.7■□□□□ 0.58
IDH3BO43837 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IDH3BO43837 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IDH3BO43837 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IDH3BO43837 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IDH3BO43837 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IDH3BO43837 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.7■□□□□ 0.58
IDH3BO43837 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
IDH3BO43837 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.7■□□□□ 0.58
IDH3BO43837 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.7■□□□□ 0.58
IDH3BO43837 EEF1DP3-203ENST00000566025 782 ntBASIC18.7■□□□□ 0.58
IDH3BO43837 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.7■□□□□ 0.58
IDH3BO43837 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.7■□□□□ 0.58
IDH3BO43837 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
IDH3BO43837 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
IDH3BO43837 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
IDH3BO43837 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
IDH3BO43837 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.7■□□□□ 0.58
IDH3BO43837 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
IDH3BO43837 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.7■□□□□ 0.58
IDH3BO43837 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
IDH3BO43837 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.7■□□□□ 0.58
IDH3BO43837 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
IDH3BO43837 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IDH3BO43837 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IDH3BO43837 GABARAPL3-202ENST00000624044 1851 ntBASIC18.69■□□□□ 0.58
IDH3BO43837 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IDH3BO43837 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IDH3BO43837 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.69■□□□□ 0.58
IDH3BO43837 AC012414.1-201ENST00000556676 535 ntBASIC18.69■□□□□ 0.58
IDH3BO43837 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IDH3BO43837 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
IDH3BO43837 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
IDH3BO43837 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
IDH3BO43837 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
IDH3BO43837 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IDH3BO43837 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IDH3BO43837 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
IDH3BO43837 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.68■□□□□ 0.58
IDH3BO43837 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
IDH3BO43837 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IDH3BO43837 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IDH3BO43837 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IDH3BO43837 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IDH3BO43837 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.68■□□□□ 0.58
IDH3BO43837 AF213884.3-201ENST00000563833 479 ntBASIC18.68■□□□□ 0.58
IDH3BO43837 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
IDH3BO43837 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.68■□□□□ 0.58
IDH3BO43837 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.68■□□□□ 0.58
IDH3BO43837 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IDH3BO43837 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IDH3BO43837 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
IDH3BO43837 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
IDH3BO43837 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.68■□□□□ 0.58
IDH3BO43837 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IDH3BO43837 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IDH3BO43837 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
IDH3BO43837 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IDH3BO43837 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
IDH3BO43837 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
IDH3BO43837 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.68■□□□□ 0.58
IDH3BO43837 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IDH3BO43837 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IDH3BO43837 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
IDH3BO43837 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IDH3BO43837 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IDH3BO43837 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
IDH3BO43837 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IDH3BO43837 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.67■□□□□ 0.58
IDH3BO43837 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IDH3BO43837 LETM1P2-201ENST00000597330 2178 ntBASIC18.67■□□□□ 0.58
IDH3BO43837 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.67■□□□□ 0.58
IDH3BO43837 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IDH3BO43837 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IDH3BO43837 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.67■□□□□ 0.58
IDH3BO43837 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.67■□□□□ 0.58
IDH3BO43837 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.67■□□□□ 0.58
IDH3BO43837 AL136967.2-201ENST00000623968 743 ntBASIC18.67■□□□□ 0.58
IDH3BO43837 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.67■□□□□ 0.58
IDH3BO43837 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IDH3BO43837 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
IDH3BO43837 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IDH3BO43837 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IDH3BO43837 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IDH3BO43837 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
IDH3BO43837 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms