Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MID1O15344 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MID1O15344 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.55■□□□□ 0.88
MID1O15344 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MID1O15344 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MID1O15344 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
MID1O15344 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.55■□□□□ 0.88
MID1O15344 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.55■□□□□ 0.88
MID1O15344 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
MID1O15344 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MID1O15344 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.55■□□□□ 0.88
MID1O15344 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
MID1O15344 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MID1O15344 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
MID1O15344 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.55■□□□□ 0.88
MID1O15344 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.55■□□□□ 0.88
MID1O15344 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.55■□□□□ 0.88
MID1O15344 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.55■□□□□ 0.88
MID1O15344 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
MID1O15344 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MID1O15344 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MID1O15344 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MID1O15344 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MID1O15344 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
MID1O15344 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MID1O15344 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
MID1O15344 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.54■□□□□ 0.88
MID1O15344 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
MID1O15344 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.54■□□□□ 0.88
MID1O15344 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MID1O15344 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MID1O15344 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MID1O15344 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.54■□□□□ 0.88
MID1O15344 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MID1O15344 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
MID1O15344 AL356652.1-201ENST00000615962 565 ntBASIC20.54■□□□□ 0.88
MID1O15344 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MID1O15344 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.54■□□□□ 0.88
MID1O15344 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MID1O15344 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.53■□□□□ 0.88
MID1O15344 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MID1O15344 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MID1O15344 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
MID1O15344 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
MID1O15344 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MID1O15344 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MID1O15344 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.53■□□□□ 0.88
MID1O15344 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MID1O15344 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.53■□□□□ 0.88
MID1O15344 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
MID1O15344 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MID1O15344 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MID1O15344 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
MID1O15344 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
MID1O15344 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MID1O15344 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MID1O15344 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.52■□□□□ 0.88
MID1O15344 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MID1O15344 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MID1O15344 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.52■□□□□ 0.88
MID1O15344 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MID1O15344 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.52■□□□□ 0.88
MID1O15344 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MID1O15344 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MID1O15344 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MID1O15344 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.52■□□□□ 0.88
MID1O15344 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
MID1O15344 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
MID1O15344 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
MID1O15344 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
MID1O15344 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.52■□□□□ 0.87
MID1O15344 AC011484.1-201ENST00000377652 1995 ntBASIC20.52■□□□□ 0.87
MID1O15344 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.52■□□□□ 0.87
MID1O15344 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MID1O15344 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MID1O15344 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
MID1O15344 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
MID1O15344 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MID1O15344 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MID1O15344 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.51■□□□□ 0.87
MID1O15344 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.51■□□□□ 0.87
MID1O15344 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MID1O15344 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MID1O15344 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MID1O15344 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.5■□□□□ 0.87
MID1O15344 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.5■□□□□ 0.87
MID1O15344 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
MID1O15344 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
MID1O15344 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.5■□□□□ 0.87
MID1O15344 KRT17P3-201ENST00000420566 1262 ntBASIC20.5■□□□□ 0.87
MID1O15344 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
MID1O15344 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
MID1O15344 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MID1O15344 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
MID1O15344 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MID1O15344 AC079834.2-201ENST00000609776 1949 ntBASIC20.5■□□□□ 0.87
MID1O15344 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
MID1O15344 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.5■□□□□ 0.87
MID1O15344 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.5■□□□□ 0.87
MID1O15344 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms