Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASQ2O14958 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CASQ2O14958 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASQ2O14958 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CASQ2O14958 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASQ2O14958 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CASQ2O14958 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.44■□□□□ 0.7
CASQ2O14958 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASQ2O14958 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASQ2O14958 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.44■□□□□ 0.7
CASQ2O14958 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CASQ2O14958 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CASQ2O14958 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.44■□□□□ 0.7
CASQ2O14958 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASQ2O14958 AC026471.1-201ENST00000564629 3026 ntBASIC19.43■□□□□ 0.7
CASQ2O14958 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CASQ2O14958 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CASQ2O14958 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CASQ2O14958 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASQ2O14958 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CASQ2O14958 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
CASQ2O14958 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASQ2O14958 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CASQ2O14958 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASQ2O14958 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.43■□□□□ 0.7
CASQ2O14958 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CASQ2O14958 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.43■□□□□ 0.7
CASQ2O14958 AC068587.7-201ENST00000641602 218 ntBASIC19.43■□□□□ 0.7
CASQ2O14958 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASQ2O14958 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.43■□□□□ 0.7
CASQ2O14958 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CASQ2O14958 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.43■□□□□ 0.7
CASQ2O14958 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASQ2O14958 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CASQ2O14958 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASQ2O14958 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
CASQ2O14958 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CASQ2O14958 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASQ2O14958 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASQ2O14958 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CASQ2O14958 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CASQ2O14958 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASQ2O14958 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASQ2O14958 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASQ2O14958 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.42■□□□□ 0.7
CASQ2O14958 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CASQ2O14958 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CASQ2O14958 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CASQ2O14958 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASQ2O14958 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASQ2O14958 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASQ2O14958 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASQ2O14958 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASQ2O14958 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CASQ2O14958 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASQ2O14958 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASQ2O14958 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CASQ2O14958 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASQ2O14958 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASQ2O14958 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASQ2O14958 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.41■□□□□ 0.7
CASQ2O14958 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CASQ2O14958 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.41■□□□□ 0.7
CASQ2O14958 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.41■□□□□ 0.7
CASQ2O14958 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASQ2O14958 AC005332.7-201ENST00000614046 2005 ntBASIC19.41■□□□□ 0.7
CASQ2O14958 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CASQ2O14958 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASQ2O14958 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.41■□□□□ 0.7
CASQ2O14958 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASQ2O14958 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASQ2O14958 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CASQ2O14958 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CASQ2O14958 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASQ2O14958 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CASQ2O14958 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASQ2O14958 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASQ2O14958 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.41■□□□□ 0.7
CASQ2O14958 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CASQ2O14958 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.4■□□□□ 0.7
CASQ2O14958 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASQ2O14958 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CASQ2O14958 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.4■□□□□ 0.7
CASQ2O14958 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CASQ2O14958 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASQ2O14958 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CASQ2O14958 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CASQ2O14958 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.4■□□□□ 0.7
CASQ2O14958 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.4■□□□□ 0.7
CASQ2O14958 PVT1_1.1-201ENST00000615125 194 ntBASIC19.4■□□□□ 0.7
CASQ2O14958 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASQ2O14958 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CASQ2O14958 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASQ2O14958 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASQ2O14958 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CASQ2O14958 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASQ2O14958 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CASQ2O14958 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CASQ2O14958 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CASQ2O14958 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms