Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COPEO14579 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
COPEO14579 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COPEO14579 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
COPEO14579 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.43■□□□□ 0.86
COPEO14579 TCF3P1-201ENST00000423021 1937 ntBASIC20.43■□□□□ 0.86
COPEO14579 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
COPEO14579 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.43■□□□□ 0.86
COPEO14579 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.43■□□□□ 0.86
COPEO14579 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COPEO14579 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.43■□□□□ 0.86
COPEO14579 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.43■□□□□ 0.86
COPEO14579 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.43■□□□□ 0.86
COPEO14579 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
COPEO14579 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COPEO14579 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COPEO14579 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.43■□□□□ 0.86
COPEO14579 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COPEO14579 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.43■□□□□ 0.86
COPEO14579 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.43■□□□□ 0.86
COPEO14579 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COPEO14579 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.43■□□□□ 0.86
COPEO14579 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
COPEO14579 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COPEO14579 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.42■□□□□ 0.86
COPEO14579 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COPEO14579 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
COPEO14579 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
COPEO14579 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.42■□□□□ 0.86
COPEO14579 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COPEO14579 AC135279.3-201ENST00000610945 1311 ntBASIC20.42■□□□□ 0.86
COPEO14579 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.42■□□□□ 0.86
COPEO14579 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.42■□□□□ 0.86
COPEO14579 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COPEO14579 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COPEO14579 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
COPEO14579 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COPEO14579 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
COPEO14579 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.41■□□□□ 0.86
COPEO14579 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COPEO14579 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.41■□□□□ 0.86
COPEO14579 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COPEO14579 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.41■□□□□ 0.86
COPEO14579 AC099791.1-201ENST00000416440 715 ntBASIC20.41■□□□□ 0.86
COPEO14579 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.41■□□□□ 0.86
COPEO14579 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.41■□□□□ 0.86
COPEO14579 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COPEO14579 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COPEO14579 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COPEO14579 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COPEO14579 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COPEO14579 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COPEO14579 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COPEO14579 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.41■□□□□ 0.86
COPEO14579 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPEO14579 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
COPEO14579 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPEO14579 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPEO14579 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPEO14579 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
COPEO14579 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.4■□□□□ 0.86
COPEO14579 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.4■□□□□ 0.86
COPEO14579 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPEO14579 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPEO14579 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPEO14579 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.4■□□□□ 0.86
COPEO14579 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COPEO14579 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPEO14579 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.4■□□□□ 0.86
COPEO14579 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPEO14579 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.4■□□□□ 0.86
COPEO14579 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
COPEO14579 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
COPEO14579 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
COPEO14579 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
COPEO14579 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COPEO14579 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.39■□□□□ 0.85
COPEO14579 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COPEO14579 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COPEO14579 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
COPEO14579 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COPEO14579 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.39■□□□□ 0.85
COPEO14579 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COPEO14579 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COPEO14579 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
COPEO14579 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
COPEO14579 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.39■□□□□ 0.85
COPEO14579 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.38■□□□□ 0.85
COPEO14579 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
COPEO14579 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
COPEO14579 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
COPEO14579 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.38■□□□□ 0.85
COPEO14579 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.38■□□□□ 0.85
COPEO14579 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COPEO14579 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COPEO14579 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COPEO14579 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.38■□□□□ 0.85
COPEO14579 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
COPEO14579 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.38■□□□□ 0.85
COPEO14579 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms