Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TAF4O00268 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TAF4O00268 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.99■□□□□ 0.79
TAF4O00268 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.99■□□□□ 0.79
TAF4O00268 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TAF4O00268 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.99■□□□□ 0.79
TAF4O00268 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
TAF4O00268 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TAF4O00268 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TAF4O00268 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TAF4O00268 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TAF4O00268 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TAF4O00268 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TAF4O00268 LSM12P1-201ENST00000411836 588 ntBASIC19.98■□□□□ 0.79
TAF4O00268 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
TAF4O00268 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TAF4O00268 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
TAF4O00268 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.98■□□□□ 0.79
TAF4O00268 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.98■□□□□ 0.79
TAF4O00268 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
TAF4O00268 AC060766.5-201ENST00000590539 871 ntBASIC19.98■□□□□ 0.79
TAF4O00268 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TAF4O00268 AC097493.4-201ENST00000641197 219 ntBASIC19.98■□□□□ 0.79
TAF4O00268 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
TAF4O00268 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TAF4O00268 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TAF4O00268 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TAF4O00268 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TAF4O00268 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
TAF4O00268 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TAF4O00268 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.97■□□□□ 0.79
TAF4O00268 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TAF4O00268 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TAF4O00268 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.97■□□□□ 0.79
TAF4O00268 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TAF4O00268 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TAF4O00268 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TAF4O00268 FBXW4P1-201ENST00000426721 2239 ntBASIC19.97■□□□□ 0.79
TAF4O00268 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TAF4O00268 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.97■□□□□ 0.79
TAF4O00268 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TAF4O00268 ARMC10P1-201ENST00000313754 855 ntBASIC19.97■□□□□ 0.79
TAF4O00268 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TAF4O00268 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TAF4O00268 KRT17P3-201ENST00000420566 1262 ntBASIC19.97■□□□□ 0.79
TAF4O00268 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.97■□□□□ 0.79
TAF4O00268 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TAF4O00268 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.97■□□□□ 0.79
TAF4O00268 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.97■□□□□ 0.79
TAF4O00268 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.97■□□□□ 0.79
TAF4O00268 AL162412.1-201ENST00000567129 965 ntBASIC19.97■□□□□ 0.79
TAF4O00268 AL591742.1-201ENST00000604433 565 ntBASIC19.97■□□□□ 0.79
TAF4O00268 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.97■□□□□ 0.79
TAF4O00268 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.97■□□□□ 0.79
TAF4O00268 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TAF4O00268 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TAF4O00268 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.97■□□□□ 0.79
TAF4O00268 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TAF4O00268 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TAF4O00268 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TAF4O00268 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.97■□□□□ 0.79
TAF4O00268 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.97■□□□□ 0.79
TAF4O00268 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TAF4O00268 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TAF4O00268 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.96■□□□□ 0.79
TAF4O00268 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TAF4O00268 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TAF4O00268 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TAF4O00268 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.96■□□□□ 0.79
TAF4O00268 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.96■□□□□ 0.79
TAF4O00268 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TAF4O00268 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.96■□□□□ 0.79
TAF4O00268 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.96■□□□□ 0.79
TAF4O00268 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.96■□□□□ 0.79
TAF4O00268 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.96■□□□□ 0.79
TAF4O00268 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TAF4O00268 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TAF4O00268 KRT17P2-201ENST00000300992 1314 ntBASIC19.96■□□□□ 0.79
TAF4O00268 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TAF4O00268 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TAF4O00268 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TAF4O00268 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TAF4O00268 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TAF4O00268 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TAF4O00268 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.95■□□□□ 0.78
TAF4O00268 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.95■□□□□ 0.78
TAF4O00268 C2orf69P4-201ENST00000565394 541 ntBASIC19.95■□□□□ 0.78
TAF4O00268 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.95■□□□□ 0.78
TAF4O00268 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.95■□□□□ 0.78
TAF4O00268 AC053503.5-201ENST00000601508 636 ntBASIC19.95■□□□□ 0.78
TAF4O00268 AL353803.4-201ENST00000565882 1934 ntBASIC19.95■□□□□ 0.78
TAF4O00268 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.95■□□□□ 0.78
TAF4O00268 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
TAF4O00268 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TAF4O00268 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TAF4O00268 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TAF4O00268 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.95■□□□□ 0.78
TAF4O00268 AC092053.2-201ENST00000640557 1818 ntBASIC19.95■□□□□ 0.78
TAF4O00268 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TAF4O00268 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms