Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PIEZO2-202ENST00000383408 9718 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 TRIM49D1-201ENST00000420869 1651 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 TRIM49D2-202ENST00000623787 1651 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 CCT8-212ENST00000626972 1862 ntTSL 2 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 ZNF175-201ENST00000262259 6535 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 GABPA-201ENST00000354828 5120 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 DCN-220ENST00000552962 1930 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 AC027369.1-202ENST00000534734 1330 ntBASIC9.5□□□□□ -0.89
LMO3Q8TAP4 ADGRF4-201ENST00000283303 3162 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 EGFLAM-201ENST00000322350 4411 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 CCR6-203ENST00000400926 3216 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 ADNP-206ENST00000621696 6224 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 SPTBN1-201ENST00000333896 9075 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 RCAN1-208ENST00000482533 2686 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 RGS17-201ENST00000206262 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 PUS3-205ENST00000613398 1419 ntTSL 2 BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 EGF-204ENST00000503392 3642 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 ERMAP-203ENST00000372517 3423 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 AC092681.2-201ENST00000565102 3044 ntTSL 2 BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 HHLA1-202ENST00000434736 2369 ntAPPRIS P5 TSL 5 BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 PCDH9-204ENST00000544246 6234 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 CLIP1-201ENST00000302528 5833 ntAPPRIS P4 TSL 5 BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 TMEM68-201ENST00000334667 2401 ntTSL 2 BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 RN7SKP10-201ENST00000364291 325 ntBASIC9.49□□□□□ -0.89
LMO3Q8TAP4 SNORD83A-201ENST00000386747 95 ntBASIC9.49□□□□□ -0.89
LMO3Q8TAP4 SNORD88A-201ENST00000408314 91 ntBASIC9.49□□□□□ -0.89
LMO3Q8TAP4 AC012363.2-201ENST00000437837 555 ntTSL 4 BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 PLCE1-AS2-204ENST00000438899 945 ntTSL 2 BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 NBPF2P-201ENST00000453025 661 ntBASIC9.49□□□□□ -0.89
LMO3Q8TAP4 LINC00544-202ENST00000481738 575 ntTSL 3 BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 AC084017.1-201ENST00000483240 860 ntBASIC9.49□□□□□ -0.89
LMO3Q8TAP4 AC092943.1-201ENST00000485389 878 ntBASIC9.49□□□□□ -0.89
LMO3Q8TAP4 RN7SL291P-201ENST00000487916 289 ntBASIC9.49□□□□□ -0.89
LMO3Q8TAP4 CASC9-201ENST00000504531 1164 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 TMEM267-204ENST00000510130 721 ntTSL 3 BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 IGKV2D-18-201ENST00000519785 375 ntBASIC9.49□□□□□ -0.89
LMO3Q8TAP4 AP001973.1-201ENST00000530177 572 ntTSL 4 BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 AC138466.2-201ENST00000540993 304 ntBASIC9.49□□□□□ -0.89
LMO3Q8TAP4 AC138512.1-201ENST00000563190 434 ntTSL 3 BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 RN7SL474P-201ENST00000583485 301 ntBASIC9.49□□□□□ -0.89
LMO3Q8TAP4 OR7A3P-201ENST00000595284 907 ntBASIC9.49□□□□□ -0.89
LMO3Q8TAP4 uc_338.23-201ENST00000614169 164 ntBASIC9.49□□□□□ -0.89
LMO3Q8TAP4 GLTP-206ENST00000617457 969 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 LINC00581-201ENST00000630914 990 ntTSL 3 BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 NRG3-204ENST00000404576 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 MYOCOS-204ENST00000637642 1549 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 POLR2J3-215ENST00000511313 4630 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 TNMD-201ENST00000373031 1339 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 NLRP1-215ENST00000613500 4494 ntTSL 5 BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 CCNK-201ENST00000389879 3524 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 PLXNA2-201ENST00000367033 11444 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 DPH3-202ENST00000383775 3052 ntTSL 2 BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 SEPT10-205ENST00000415095 1605 ntTSL 5 BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 AC026746.1-201ENST00000505623 2105 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 PARP8-220ENST00000514342 2384 ntTSL 5 BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 OR9Q1-202ENST00000612174 2134 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 PTK2B-205ENST00000420218 3941 ntTSL 5 BASIC9.49□□□□□ -0.89
LMO3Q8TAP4 COL12A1-207ENST00000483888 9637 ntAPPRIS ALT1 TSL 5 BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 UBAP2L-220ENST00000613315 3451 ntTSL 2 BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 SLC22A24-201ENST00000326192 1663 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 LIPH-201ENST00000296252 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 GLDN-202ENST00000396399 4584 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 ANKUB1-202ENST00000462519 2222 ntTSL 2 BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 CCDC144B-201ENST00000285176 4310 ntBASIC9.48□□□□□ -0.89
LMO3Q8TAP4 ACLY-202ENST00000353196 4318 ntAPPRIS ALT1 TSL 5 BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 ITGA11-202ENST00000423218 10192 ntAPPRIS ALT1 TSL 2 BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 ZNF557-202ENST00000414706 5736 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 AL138831.3-201ENST00000623656 1458 ntBASIC9.48□□□□□ -0.89
LMO3Q8TAP4 LINC01226-208ENST00000640623 5019 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 ATP2B2-203ENST00000383800 8900 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 AC091013.1-201ENST00000499752 3734 ntTSL 2 BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 DCLRE1C-204ENST00000378246 2637 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 SFR1-202ENST00000369729 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 FXR1-203ENST00000445140 2651 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 VPREB1-201ENST00000302273 626 ntAPPRIS ALT2 TSL 3 BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 OFCC1-201ENST00000316020 863 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 DUSP21-201ENST00000339042 885 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 TRBV23OR9-2-201ENST00000390389 335 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 ARL4A-202ENST00000396662 1296 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 AP002761.1-201ENST00000400985 262 ntTSL 3 BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 EPPIN-203ENST00000409554 998 ntTSL 5 BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 TTLL11-IT1-201ENST00000411790 1052 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 GCNT1P1-201ENST00000416567 1295 ntBASIC9.48□□□□□ -0.89
LMO3Q8TAP4 UBTFL7-201ENST00000418789 1191 ntBASIC9.48□□□□□ -0.89
LMO3Q8TAP4 ELF5-203ENST00000429939 637 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 AC097382.1-201ENST00000441093 591 ntTSL 5 BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 RN7SL449P-201ENST00000464937 286 ntBASIC9.48□□□□□ -0.89
LMO3Q8TAP4 RPL12P42-201ENST00000481802 499 ntBASIC9.48□□□□□ -0.89
LMO3Q8TAP4 AC133435.1-201ENST00000498753 576 ntBASIC9.48□□□□□ -0.89
LMO3Q8TAP4 AC097522.1-201ENST00000507811 1042 ntBASIC9.48□□□□□ -0.89
LMO3Q8TAP4 AC084357.2-201ENST00000509615 275 ntTSL 5 BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 GAPDHP35-201ENST00000513369 976 ntBASIC9.48□□□□□ -0.89
LMO3Q8TAP4 AC116345.1-202ENST00000513379 941 ntTSL 5 BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 LINC01300-202ENST00000521073 796 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 ZNF195-220ENST00000528796 881 ntTSL 5 BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 H2AFZP4-201ENST00000534148 377 ntBASIC9.48□□□□□ -0.89
LMO3Q8TAP4 AMN1-207ENST00000536761 1025 ntTSL 2 BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 AMN1-212ENST00000542781 879 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 LINC02403-201ENST00000548215 484 ntTSL 3 BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 AC034105.5-201ENST00000564017 314 ntBASIC9.48□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms