RNA–Protein interactions for RNA: ENST00000613398.4

PUS3-205, Transcript of pseudouridylate synthase 3, humanhuman

TSL 2 BASIC

Gene PUS3, Length 1,419 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUS3-205ENST00000613398 AEBP2Q6ZN18 517 aaPredicted RBP27.06■■□□□ 1.92
PUS3-205ENST00000613398 CHIC1Q5VXU3 224 aa26.39■■□□□ 1.82
PUS3-205ENST00000613398 PHF23Q9BUL5 403 aaPredicted RBP23.15■■□□□ 1.3
PUS3-205ENST00000613398 SENP3Q9H4L4 574 aaPredicted RBP23.04■■□□□ 1.28
PUS3-205ENST00000613398 PLPPR3Q6T4P5 718 aa21.41■■□□□ 1.02
PUS3-205ENST00000613398 FOXD1Q16676 465 aa21.34■■□□□ 1.01
PUS3-205ENST00000613398 NISCHQ9Y2I1 1504 aa20.83■□□□□ 0.92
PUS3-205ENST00000613398 PPP6R1Q9UPN7 881 aa20.44■□□□□ 0.86
PUS3-205ENST00000613398 ADRA2BP18089 450 aa20.4■□□□□ 0.86
PUS3-205ENST00000613398 PIAS4Q8N2W9 510 aaPredicted RBP20.1■□□□□ 0.81
PUS3-205ENST00000613398 MSH5O43196 834 aa19.77■□□□□ 0.76
PUS3-205ENST00000613398 ABCC9O60706 1549 aa19.34■□□□□ 0.69
PUS3-205ENST00000613398 CCDC180Q9P1Z9 1646 aa19■□□□□ 0.63
PUS3-205ENST00000613398 PPP4R3CPQ6ZMV5 832 aa18.82■□□□□ 0.6
PUS3-205ENST00000613398 SCAF1Q9H7N4 1312 aaKnown RBP18.76■□□□□ 0.59
PUS3-205ENST00000613398 DNAJC5BQ9UF47 199 aa18.56■□□□□ 0.56
PUS3-205ENST00000613398 MAPK8IP2Q13387 824 aaPredicted RBP18.52■□□□□ 0.56
PUS3-205ENST00000613398 DMRT2Q9Y5R5 561 aa18.37■□□□□ 0.53
PUS3-205ENST00000613398 NCBP3Q53F19 620 aaKnown RBP18.34■□□□□ 0.53
PUS3-205ENST00000613398 CNKSR2Q8WXI2 1034 aa18.34■□□□□ 0.53
PUS3-205ENST00000613398 KCNA4P22459 653 aa18.26■□□□□ 0.51
PUS3-205ENST00000613398 RB1CC1Q8TDY2 1594 aa18.25■□□□□ 0.51
PUS3-205ENST00000613398 POTEDQ86YR6 584 aa18.1■□□□□ 0.49
PUS3-205ENST00000613398 NPM3O75607 178 aaKnown RBP18.03■□□□□ 0.48
PUS3-205ENST00000613398 NACADO15069 1562 aa18.02■□□□□ 0.48
PUS3-205ENST00000613398 RNF216Q9NWF9 866 aaPredicted RBP18.01■□□□□ 0.47
PUS3-205ENST00000613398 HOXD11P31277 338 aaPredicted RBP17.97■□□□□ 0.47
PUS3-205ENST00000613398 UNC13AQ9UPW8 1703 aa17.88■□□□□ 0.45
PUS3-205ENST00000613398 PABPN1Q86U42 306 aaKnown RBP eCLIP17.85■□□□□ 0.45
PUS3-205ENST00000613398 BICRAQ9NZM4 1560 aa17.78■□□□□ 0.44
PUS3-205ENST00000613398 MYO15BQ96JP2 1530 aa17.66■□□□□ 0.42
PUS3-205ENST00000613398 DCAF8L2P0C7V8 631 aa17.55■□□□□ 0.4
PUS3-205ENST00000613398 SHROOM4Q9ULL8 1493 aa17.53■□□□□ 0.4
PUS3-205ENST00000613398 CC2D2AQ9P2K1 1620 aa17.51■□□□□ 0.39
PUS3-205ENST00000613398 CECR2Q9BXF3 1484 aa17.5■□□□□ 0.39
PUS3-205ENST00000613398 DCAF8L1A6NGE4 600 aa17.5■□□□□ 0.39
PUS3-205ENST00000613398 DNAJC5Q9H3Z4 198 aa17.41■□□□□ 0.38
PUS3-205ENST00000613398 SLC4A1APQ9BWU0 796 aaKnown RBP17.39■□□□□ 0.38
PUS3-205ENST00000613398 EIF4G1Q04637 1599 aaKnown RBP17.36■□□□□ 0.37
PUS3-205ENST00000613398 DCAF1Q9Y4B6 1507 aa17.23■□□□□ 0.35
PUS3-205ENST00000613398 ZCCHC6Q5VYS8 1495 aaKnown RBP17.2■□□□□ 0.34
PUS3-205ENST00000613398 SCRIBQ14160 1630 aa17.19■□□□□ 0.34
PUS3-205ENST00000613398 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.08■□□□□ 0.32
PUS3-205ENST00000613398 SLC4A2P04920 1241 aa17.04■□□□□ 0.32
PUS3-205ENST00000613398 CUX2O14529 1486 aa16.95■□□□□ 0.3
PUS3-205ENST00000613398 RNF39Q9H2S5 420 aa16.91■□□□□ 0.3
PUS3-205ENST00000613398 FOXD4L1Q9NU39 408 aa16.88■□□□□ 0.29
PUS3-205ENST00000613398 U3KPZ7 1027 aaPredicted RBP16.8■□□□□ 0.28
PUS3-205ENST00000613398 ZBTB22O15209 634 aa16.79■□□□□ 0.28
PUS3-205ENST00000613398 EHMT2Q96KQ7 1210 aa16.75■□□□□ 0.27
PUS3-205ENST00000613398 ERCC6Q03468 1493 aa16.74■□□□□ 0.27
PUS3-205ENST00000613398 C1QBPQ07021 282 aaKnown RBP16.73■□□□□ 0.27
PUS3-205ENST00000613398 MYCNP04198 464 aaPredicted RBP16.7■□□□□ 0.26
PUS3-205ENST00000613398 CSRNP3Q8WYN3 585 aa16.63■□□□□ 0.25
PUS3-205ENST00000613398 NCAPD3P42695 1498 aa16.62■□□□□ 0.25
PUS3-205ENST00000613398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.62■□□□□ 0.25
PUS3-205ENST00000613398 HNRNPUL2Q1KMD3 747 aaKnown RBP16.62■□□□□ 0.25
PUS3-205ENST00000613398 SAMD1Q6SPF0 538 aaPredicted RBP16.54■□□□□ 0.24
PUS3-205ENST00000613398 THOC2Q8NI27 1593 aaKnown RBP16.53■□□□□ 0.24
PUS3-205ENST00000613398 HMGXB3Q12766 1538 aa16.51■□□□□ 0.23
PUS3-205ENST00000613398 CACNB1Q02641 598 aaPredicted RBP16.51■□□□□ 0.23
PUS3-205ENST00000613398 NESP48681 1621 aa16.49■□□□□ 0.23
PUS3-205ENST00000613398 APLP2Q06481 763 aa16.49■□□□□ 0.23
PUS3-205ENST00000613398 ATAD2BQ9ULI0 1458 aa16.49■□□□□ 0.23
PUS3-205ENST00000613398 SMARCA2P51531 1590 aa16.44■□□□□ 0.22
PUS3-205ENST00000613398 SMARCA4P51532 1647 aa16.39■□□□□ 0.21
PUS3-205ENST00000613398 TRIM41Q8WV44 630 aa16.36■□□□□ 0.21
PUS3-205ENST00000613398 LAMC3Q9Y6N6 1575 aa16.35■□□□□ 0.21
PUS3-205ENST00000613398 ATXN8OSP0DMR3 200 aa16.34■□□□□ 0.21
PUS3-205ENST00000613398 SPINK5Q9NQ38 1064 aaPredicted RBP16.32■□□□□ 0.2
PUS3-205ENST00000613398 KIF21AQ7Z4S6 1674 aa16.31■□□□□ 0.2
PUS3-205ENST00000613398 BAZ1BQ9UIG0 1483 aaKnown RBP16.3■□□□□ 0.2
PUS3-205ENST00000613398 CAPN15O75808 1086 aa16.28■□□□□ 0.2
PUS3-205ENST00000613398 PEG3Q9GZU2 1588 aa16.27■□□□□ 0.19
PUS3-205ENST00000613398 ZNF219Q9P2Y4 722 aaPredicted RBP16.24■□□□□ 0.19
PUS3-205ENST00000613398 PDS5BQ9NTI5 1447 aa16.21■□□□□ 0.19
PUS3-205ENST00000613398 BAZ1AQ9NRL2 1556 aaPredicted RBP16.21■□□□□ 0.19
PUS3-205ENST00000613398 ATF5Q9Y2D1 282 aaPredicted RBP16.19■□□□□ 0.18
PUS3-205ENST00000613398 TRHP20396 242 aaPredicted RBP16.17■□□□□ 0.18
PUS3-205ENST00000613398 WDR62O43379 1518 aa16.17■□□□□ 0.18
PUS3-205ENST00000613398 MRC2Q9UBG0 1479 aa16.15■□□□□ 0.18
PUS3-205ENST00000613398 CADPSQ9ULU8 1353 aa16.05■□□□□ 0.16
PUS3-205ENST00000613398 DSG3P32926 999 aa16.04■□□□□ 0.16
PUS3-205ENST00000613398 MROH2BQ7Z745 1585 aa16.03■□□□□ 0.16
PUS3-205ENST00000613398 CEP164Q9UPV0 1460 aa15.96■□□□□ 0.15
PUS3-205ENST00000613398 OSCARQ8IYS5 282 aa15.95■□□□□ 0.14
PUS3-205ENST00000613398 ABCB7O75027 752 aa15.94■□□□□ 0.14
PUS3-205ENST00000613398 RIMBP3CA6NJZ7 1639 aa15.93■□□□□ 0.14
PUS3-205ENST00000613398 RIMBP3BA6NNM3 1639 aa15.93■□□□□ 0.14
PUS3-205ENST00000613398 RIMBP3Q9UFD9 1639 aa15.93■□□□□ 0.14
PUS3-205ENST00000613398 POLA2Q14181 598 aa15.9■□□□□ 0.14
PUS3-205ENST00000613398 FANCD2Q9BXW9 1451 aa15.89■□□□□ 0.13
PUS3-205ENST00000613398 ARHGEF11O15085 1522 aa15.82■□□□□ 0.12
PUS3-205ENST00000613398 WIZO95785 1651 aa15.81■□□□□ 0.12
PUS3-205ENST00000613398 URB2Q14146 1524 aaKnown RBP15.81■□□□□ 0.12
PUS3-205ENST00000613398 CFTRP13569 1480 aa15.81■□□□□ 0.12
PUS3-205ENST00000613398 ZBTB12Q9Y330 459 aaPredicted RBP15.72■□□□□ 0.11
PUS3-205ENST00000613398 ZNF608Q9ULD9 1512 aaPredicted RBP15.68■□□□□ 0.1
PUS3-205ENST00000613398 PRDM2Q13029 1718 aa15.67■□□□□ 0.1
PUS3-205ENST00000613398 IFT140Q96RY7 1462 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms