RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 AEBP2Q6ZN18 517 aaPredicted RBP28.96■■■□□ 2.23
CASC9-201ENST00000504531 CHIC1Q5VXU3 224 aa28.29■■■□□ 2.12
CASC9-201ENST00000504531 PHF23Q9BUL5 403 aaPredicted RBP24.79■■□□□ 1.56
CASC9-201ENST00000504531 SENP3Q9H4L4 574 aaPredicted RBP24.73■■□□□ 1.55
CASC9-201ENST00000504531 PLPPR3Q6T4P5 718 aa22.98■■□□□ 1.27
CASC9-201ENST00000504531 FOXD1Q16676 465 aa22.86■■□□□ 1.25
CASC9-201ENST00000504531 PPP6R1Q9UPN7 881 aa21.88■■□□□ 1.09
CASC9-201ENST00000504531 ADRA2BP18089 450 aa21.87■■□□□ 1.09
CASC9-201ENST00000504531 PIAS4Q8N2W9 510 aaPredicted RBP21.59■■□□□ 1.05
CASC9-201ENST00000504531 MSH5O43196 834 aa21.24■□□□□ 0.99
CASC9-201ENST00000504531 PPP4R3CPQ6ZMV5 832 aa20.19■□□□□ 0.82
CASC9-201ENST00000504531 SCAF1Q9H7N4 1312 aaKnown RBP20.18■□□□□ 0.82
CASC9-201ENST00000504531 MAPK8IP2Q13387 824 aaPredicted RBP19.85■□□□□ 0.77
CASC9-201ENST00000504531 NCBP3Q53F19 620 aaKnown RBP19.72■□□□□ 0.75
CASC9-201ENST00000504531 POTEDQ86YR6 584 aa19.7■□□□□ 0.74
CASC9-201ENST00000504531 CNKSR2Q8WXI2 1034 aa19.69■□□□□ 0.74
CASC9-201ENST00000504531 DMRT2Q9Y5R5 561 aa19.69■□□□□ 0.74
CASC9-201ENST00000504531 KCNA4P22459 653 aa19.56■□□□□ 0.72
CASC9-201ENST00000504531 NPM3O75607 178 aaKnown RBP19.33■□□□□ 0.68
CASC9-201ENST00000504531 RNF216Q9NWF9 866 aaPredicted RBP19.33■□□□□ 0.68
CASC9-201ENST00000504531 HOXD11P31277 338 aaPredicted RBP19.26■□□□□ 0.67
CASC9-201ENST00000504531 DNAJC5BQ9UF47 199 aa18.88■□□□□ 0.61
CASC9-201ENST00000504531 DCAF8L1A6NGE4 600 aa18.82■□□□□ 0.6
CASC9-201ENST00000504531 SLC4A1APQ9BWU0 796 aaKnown RBP18.67■□□□□ 0.58
CASC9-201ENST00000504531 NISCHQ9Y2I1 1504 aa18.54■□□□□ 0.56
CASC9-201ENST00000504531 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.36■□□□□ 0.53
CASC9-201ENST00000504531 SLC4A2P04920 1241 aa18.24■□□□□ 0.51
CASC9-201ENST00000504531 RNF39Q9H2S5 420 aa18.13■□□□□ 0.49
CASC9-201ENST00000504531 FOXD4L1Q9NU39 408 aa18.12■□□□□ 0.49
CASC9-201ENST00000504531 U3KPZ7 1027 aaPredicted RBP18■□□□□ 0.47
CASC9-201ENST00000504531 EHMT2Q96KQ7 1210 aa17.97■□□□□ 0.47
CASC9-201ENST00000504531 ZBTB22O15209 634 aa17.96■□□□□ 0.47
CASC9-201ENST00000504531 C1QBPQ07021 282 aaKnown RBP17.96■□□□□ 0.47
CASC9-201ENST00000504531 MYCNP04198 464 aaPredicted RBP17.93■□□□□ 0.46
CASC9-201ENST00000504531 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.88■□□□□ 0.45
CASC9-201ENST00000504531 HNRNPUL2Q1KMD3 747 aaKnown RBP17.88■□□□□ 0.45
CASC9-201ENST00000504531 CSRNP3Q8WYN3 585 aa17.82■□□□□ 0.44
CASC9-201ENST00000504531 SAMD1Q6SPF0 538 aaPredicted RBP17.77■□□□□ 0.44
CASC9-201ENST00000504531 APLP2Q06481 763 aa17.76■□□□□ 0.43
CASC9-201ENST00000504531 CACNB1Q02641 598 aaPredicted RBP17.74■□□□□ 0.43
CASC9-201ENST00000504531 ATXN8OSP0DMR3 200 aa17.54■□□□□ 0.4
CASC9-201ENST00000504531 CAPN15O75808 1086 aa17.49■□□□□ 0.39
CASC9-201ENST00000504531 SPINK5Q9NQ38 1064 aaPredicted RBP17.49■□□□□ 0.39
CASC9-201ENST00000504531 ZNF219Q9P2Y4 722 aaPredicted RBP17.45■□□□□ 0.38
CASC9-201ENST00000504531 TRHP20396 242 aaPredicted RBP17.37■□□□□ 0.37
CASC9-201ENST00000504531 ATF5Q9Y2D1 282 aaPredicted RBP17.32■□□□□ 0.36
CASC9-201ENST00000504531 DSG3P32926 999 aa17.2■□□□□ 0.34
CASC9-201ENST00000504531 ABCB7O75027 752 aa17.1■□□□□ 0.33
CASC9-201ENST00000504531 POLA2Q14181 598 aa17.07■□□□□ 0.32
CASC9-201ENST00000504531 ZBTB12Q9Y330 459 aaPredicted RBP16.9■□□□□ 0.3
CASC9-201ENST00000504531 FBLN2P98095 1184 aa16.75■□□□□ 0.27
CASC9-201ENST00000504531 MKRN4PQ13434 485 aaPredicted RBP16.59■□□□□ 0.25
CASC9-201ENST00000504531 RBM42Q9BTD8 480 aaKnown RBP16.51■□□□□ 0.23
CASC9-201ENST00000504531 OSCARQ8IYS5 282 aa16.48■□□□□ 0.23
CASC9-201ENST00000504531 SPDYE2BA6NHP3 402 aa16.39■□□□□ 0.21
CASC9-201ENST00000504531 SPDYE6P0CI01 402 aa16.39■□□□□ 0.21
CASC9-201ENST00000504531 SPDYE2Q495Y8 402 aa16.39■□□□□ 0.21
CASC9-201ENST00000504531 ZNF692Q9BU19 519 aaPredicted RBP16.28■□□□□ 0.2
CASC9-201ENST00000504531 SPDYE4A6NLX3 237 aa16.25■□□□□ 0.19
CASC9-201ENST00000504531 AKT1S1Q96B36 256 aa16.24■□□□□ 0.19
CASC9-201ENST00000504531 SSUH2Q9Y2M2 353 aa16.21■□□□□ 0.19
CASC9-201ENST00000504531 ABCC9O60706 1549 aa16.17■□□□□ 0.18
CASC9-201ENST00000504531 FKBP8Q14318 412 aa16.14■□□□□ 0.17
CASC9-201ENST00000504531 PABPN1Q86U42 306 aaKnown RBP eCLIP16.04■□□□□ 0.16
CASC9-201ENST00000504531 REM2Q8IYK8 340 aaPredicted RBP16.03■□□□□ 0.16
CASC9-201ENST00000504531 CCDC180Q9P1Z9 1646 aa16■□□□□ 0.15
CASC9-201ENST00000504531 PROM2Q8N271 834 aa15.95■□□□□ 0.14
CASC9-201ENST00000504531 SPDYE1Q8NFV5 336 aaPredicted RBP15.92■□□□□ 0.14
CASC9-201ENST00000504531 STAG3Q9UJ98 1225 aa15.85■□□□□ 0.13
CASC9-201ENST00000504531 PITPNM1O00562 1244 aa15.83■□□□□ 0.12
CASC9-201ENST00000504531 CLEC11AQ9Y240 323 aa15.81■□□□□ 0.12
CASC9-201ENST00000504531 CHRDL2Q6WN34 429 aa15.77■□□□□ 0.12
CASC9-201ENST00000504531 FBXO3Q9UK99 471 aa15.71■□□□□ 0.11
CASC9-201ENST00000504531 PRR29P0C7W0 189 aa15.69■□□□□ 0.1
CASC9-201ENST00000504531 ZCCHC6Q5VYS8 1495 aaKnown RBP15.68■□□□□ 0.1
CASC9-201ENST00000504531 FXR2P51116 673 aaKnown RBP eCLIP15.58■□□□□ 0.08
CASC9-201ENST00000504531 PIP4P2Q8N4L2 257 aa15.53■□□□□ 0.08
CASC9-201ENST00000504531 DCAF1Q9Y4B6 1507 aa15.49■□□□□ 0.07
CASC9-201ENST00000504531 PLEKHG5O94827 1062 aa15.46■□□□□ 0.07
CASC9-201ENST00000504531 PRKAR2AP13861 404 aaKnown RBP15.45■□□□□ 0.06
CASC9-201ENST00000504531 MIER1Q8N108 512 aa15.42■□□□□ 0.06
CASC9-201ENST00000504531 VASPP50552 380 aaPredicted RBP15.41■□□□□ 0.06
CASC9-201ENST00000504531 PLCD3Q8N3E9 789 aa15.41■□□□□ 0.06
CASC9-201ENST00000504531 CREBZFQ9NS37 354 aa15.41■□□□□ 0.06
CASC9-201ENST00000504531 CHADLQ6NUI6 762 aa15.38■□□□□ 0.05
CASC9-201ENST00000504531 POTEHQ6S545 545 aa15.38■□□□□ 0.05
CASC9-201ENST00000504531 ZBTB47Q9UFB7 747 aaPredicted RBP15.33■□□□□ 0.04
CASC9-201ENST00000504531 FARP1Q9Y4F1 1045 aaPredicted RBP15.29■□□□□ 0.04
CASC9-201ENST00000504531 DCAF8L2P0C7V8 631 aa15.26■□□□□ 0.03
CASC9-201ENST00000504531 NPM1P06748 294 aaKnown RBP eCLIP15.25■□□□□ 0.03
CASC9-201ENST00000504531 MNX1P50219 401 aaPredicted RBP15.22■□□□□ 0.03
CASC9-201ENST00000504531 KLHL34Q8N239 644 aa15.19■□□□□ 0.02
CASC9-201ENST00000504531 SHROOM4Q9ULL8 1493 aa15.18■□□□□ 0.02
CASC9-201ENST00000504531 MYO15BQ96JP2 1530 aa15.17■□□□□ 0.02
CASC9-201ENST00000504531 IFNLR1Q8IU57 520 aaPredicted RBP15.15■□□□□ 0.02
CASC9-201ENST00000504531 RB1CC1Q8TDY2 1594 aa15.11■□□□□ 0.01
CASC9-201ENST00000504531 HAX1O00165 279 aa15.08■□□□□ 0
CASC9-201ENST00000504531 C19orf67A6NJJ6 358 aa15.05■□□□□ -0
CASC9-201ENST00000504531 SPOCK2Q92563 424 aa15.05■□□□□ -0
CASC9-201ENST00000504531 PAK3O75914 559 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms