RNA–Protein interactions for RNA: ENST00000373031.4

TNMD-201, Transcript of tenomodulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNMD, Length 1,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNMD-201ENST00000373031 AEBP2Q6ZN18 517 aaPredicted RBP27.56■■■□□ 2
TNMD-201ENST00000373031 CHIC1Q5VXU3 224 aa25.97■■□□□ 1.75
TNMD-201ENST00000373031 NISCHQ9Y2I1 1504 aa23.52■■□□□ 1.36
TNMD-201ENST00000373031 SENP3Q9H4L4 574 aaPredicted RBP23.37■■□□□ 1.33
TNMD-201ENST00000373031 PHF23Q9BUL5 403 aaPredicted RBP23.13■■□□□ 1.29
TNMD-201ENST00000373031 FOXD1Q16676 465 aa21.91■■□□□ 1.1
TNMD-201ENST00000373031 ABCC9O60706 1549 aa21.32■■□□□ 1
TNMD-201ENST00000373031 CCDC180Q9P1Z9 1646 aa21.24■□□□□ 0.99
TNMD-201ENST00000373031 PLPPR3Q6T4P5 718 aa20.65■□□□□ 0.9
TNMD-201ENST00000373031 PPP6R1Q9UPN7 881 aa20.46■□□□□ 0.87
TNMD-201ENST00000373031 MSH5O43196 834 aa20.42■□□□□ 0.86
TNMD-201ENST00000373031 PIAS4Q8N2W9 510 aaPredicted RBP20.38■□□□□ 0.85
TNMD-201ENST00000373031 ADRA2BP18089 450 aa20.36■□□□□ 0.85
TNMD-201ENST00000373031 RB1CC1Q8TDY2 1594 aa20.28■□□□□ 0.84
TNMD-201ENST00000373031 POTEDQ86YR6 584 aa20.23■□□□□ 0.83
TNMD-201ENST00000373031 DNAJC5BQ9UF47 199 aa20.16■□□□□ 0.82
TNMD-201ENST00000373031 NACADO15069 1562 aa20.11■□□□□ 0.81
TNMD-201ENST00000373031 UNC13AQ9UPW8 1703 aa19.84■□□□□ 0.77
TNMD-201ENST00000373031 DCAF8L2P0C7V8 631 aa19.84■□□□□ 0.77
TNMD-201ENST00000373031 MYO15BQ96JP2 1530 aa19.8■□□□□ 0.76
TNMD-201ENST00000373031 PABPN1Q86U42 306 aaKnown RBP eCLIP19.79■□□□□ 0.76
TNMD-201ENST00000373031 BICRAQ9NZM4 1560 aa19.68■□□□□ 0.74
TNMD-201ENST00000373031 DCAF1Q9Y4B6 1507 aa19.47■□□□□ 0.71
TNMD-201ENST00000373031 ZCCHC6Q5VYS8 1495 aaKnown RBP19.45■□□□□ 0.7
TNMD-201ENST00000373031 SHROOM4Q9ULL8 1493 aa19.45■□□□□ 0.7
TNMD-201ENST00000373031 CC2D2AQ9P2K1 1620 aa19.29■□□□□ 0.68
TNMD-201ENST00000373031 CECR2Q9BXF3 1484 aa19.25■□□□□ 0.67
TNMD-201ENST00000373031 SCRIBQ14160 1630 aa19.25■□□□□ 0.67
TNMD-201ENST00000373031 EIF4G1Q04637 1599 aaKnown RBP19.21■□□□□ 0.67
TNMD-201ENST00000373031 MAPK8IP2Q13387 824 aaPredicted RBP18.77■□□□□ 0.6
TNMD-201ENST00000373031 DNAJC5Q9H3Z4 198 aa18.7■□□□□ 0.58
TNMD-201ENST00000373031 DMRT2Q9Y5R5 561 aa18.56■□□□□ 0.56
TNMD-201ENST00000373031 NCAPD3P42695 1498 aa18.56■□□□□ 0.56
TNMD-201ENST00000373031 CUX2O14529 1486 aa18.52■□□□□ 0.55
TNMD-201ENST00000373031 SCAF1Q9H7N4 1312 aaKnown RBP18.46■□□□□ 0.55
TNMD-201ENST00000373031 ATAD2BQ9ULI0 1458 aa18.44■□□□□ 0.54
TNMD-201ENST00000373031 ERCC6Q03468 1493 aa18.43■□□□□ 0.54
TNMD-201ENST00000373031 SMARCA2P51531 1590 aa18.41■□□□□ 0.54
TNMD-201ENST00000373031 HMGXB3Q12766 1538 aa18.4■□□□□ 0.54
TNMD-201ENST00000373031 SMARCA4P51532 1647 aa18.38■□□□□ 0.53
TNMD-201ENST00000373031 BAZ1AQ9NRL2 1556 aaPredicted RBP18.27■□□□□ 0.52
TNMD-201ENST00000373031 NESP48681 1621 aa18.26■□□□□ 0.51
TNMD-201ENST00000373031 PEG3Q9GZU2 1588 aa18.25■□□□□ 0.51
TNMD-201ENST00000373031 BAZ1BQ9UIG0 1483 aaKnown RBP18.25■□□□□ 0.51
TNMD-201ENST00000373031 LAMC3Q9Y6N6 1575 aa18.18■□□□□ 0.5
TNMD-201ENST00000373031 THOC2Q8NI27 1593 aaKnown RBP18.16■□□□□ 0.5
TNMD-201ENST00000373031 PPP4R3CPQ6ZMV5 832 aa18.15■□□□□ 0.5
TNMD-201ENST00000373031 MROH2BQ7Z745 1585 aa18.1■□□□□ 0.49
TNMD-201ENST00000373031 KIF21AQ7Z4S6 1674 aa18.07■□□□□ 0.48
TNMD-201ENST00000373031 PDS5BQ9NTI5 1447 aa18.05■□□□□ 0.48
TNMD-201ENST00000373031 CADPSQ9ULU8 1353 aa17.95■□□□□ 0.46
TNMD-201ENST00000373031 MRC2Q9UBG0 1479 aa17.9■□□□□ 0.46
TNMD-201ENST00000373031 WIZO95785 1651 aa17.87■□□□□ 0.45
TNMD-201ENST00000373031 WDR62O43379 1518 aa17.87■□□□□ 0.45
TNMD-201ENST00000373031 HOXD11P31277 338 aaPredicted RBP17.84■□□□□ 0.45
TNMD-201ENST00000373031 DCAF8L1A6NGE4 600 aa17.79■□□□□ 0.44
TNMD-201ENST00000373031 CEP164Q9UPV0 1460 aa17.78■□□□□ 0.44
TNMD-201ENST00000373031 CNKSR2Q8WXI2 1034 aa17.78■□□□□ 0.44
TNMD-201ENST00000373031 FANCD2Q9BXW9 1451 aa17.74■□□□□ 0.43
TNMD-201ENST00000373031 CFTRP13569 1480 aa17.73■□□□□ 0.43
TNMD-201ENST00000373031 TRIM41Q8WV44 630 aa17.72■□□□□ 0.43
TNMD-201ENST00000373031 RSF1Q96T23 1441 aaPredicted RBP17.66■□□□□ 0.42
TNMD-201ENST00000373031 RNF216Q9NWF9 866 aaPredicted RBP17.65■□□□□ 0.42
TNMD-201ENST00000373031 TOP2AP11388 1531 aaKnown RBP17.64■□□□□ 0.41
TNMD-201ENST00000373031 CACNB1Q02641 598 aaPredicted RBP17.64■□□□□ 0.41
TNMD-201ENST00000373031 OSCARQ8IYS5 282 aa17.61■□□□□ 0.41
TNMD-201ENST00000373031 URB2Q14146 1524 aaKnown RBP17.6■□□□□ 0.41
TNMD-201ENST00000373031 PRDM2Q13029 1718 aa17.59■□□□□ 0.41
TNMD-201ENST00000373031 RNF39Q9H2S5 420 aa17.49■□□□□ 0.39
TNMD-201ENST00000373031 IFT140Q96RY7 1462 aa17.45■□□□□ 0.38
TNMD-201ENST00000373031 CCDC88BA6NC98 1476 aa17.43■□□□□ 0.38
TNMD-201ENST00000373031 RIMBP3CA6NJZ7 1639 aa17.4■□□□□ 0.38
TNMD-201ENST00000373031 RIMBP3BA6NNM3 1639 aa17.4■□□□□ 0.38
TNMD-201ENST00000373031 RIMBP3Q9UFD9 1639 aa17.4■□□□□ 0.38
TNMD-201ENST00000373031 ZNF608Q9ULD9 1512 aaPredicted RBP17.4■□□□□ 0.38
TNMD-201ENST00000373031 ABCC8Q09428 1581 aa17.39■□□□□ 0.38
TNMD-201ENST00000373031 TOPBP1Q92547 1522 aa17.39■□□□□ 0.37
TNMD-201ENST00000373031 EIF4G3O43432 1585 aaKnown RBP17.32■□□□□ 0.36
TNMD-201ENST00000373031 DNMBPQ6XZF7 1577 aa17.32■□□□□ 0.36
TNMD-201ENST00000373031 ARHGEF11O15085 1522 aa17.32■□□□□ 0.36
TNMD-201ENST00000373031 NCBP3Q53F19 620 aaKnown RBP17.32■□□□□ 0.36
TNMD-201ENST00000373031 KCNA4P22459 653 aa17.28■□□□□ 0.36
TNMD-201ENST00000373031 TARBP1Q13395 1621 aaKnown RBP17.27■□□□□ 0.36
TNMD-201ENST00000373031 CHD1O14646 1710 aa17.25■□□□□ 0.35
TNMD-201ENST00000373031 AQRO60306 1485 aaKnown RBP eCLIP17.22■□□□□ 0.35
TNMD-201ENST00000373031 POLA1P09884 1462 aaPredicted RBP17.19■□□□□ 0.34
TNMD-201ENST00000373031 NPM3O75607 178 aaKnown RBP17.18■□□□□ 0.34
TNMD-201ENST00000373031 CYB5RLQ6IPT4 315 aa17.18■□□□□ 0.34
TNMD-201ENST00000373031 C1QBPQ07021 282 aaKnown RBP17.17■□□□□ 0.34
TNMD-201ENST00000373031 WDR97A6NE52 1622 aa17.13■□□□□ 0.33
TNMD-201ENST00000373031 ARAP1Q96P48 1450 aa17.13■□□□□ 0.33
TNMD-201ENST00000373031 FBLN2P98095 1184 aa17.12■□□□□ 0.33
TNMD-201ENST00000373031 SOGA1O94964 1423 aa17.12■□□□□ 0.33
TNMD-201ENST00000373031 RAD54L2Q9Y4B4 1467 aa17.11■□□□□ 0.33
TNMD-201ENST00000373031 TDRD9Q8NDG6 1382 aaKnown RBP17.08■□□□□ 0.32
TNMD-201ENST00000373031 FGD5Q6ZNL6 1462 aa17.05■□□□□ 0.32
TNMD-201ENST00000373031 CLASP1Q7Z460 1538 aa17.05■□□□□ 0.32
TNMD-201ENST00000373031 SNAPC4Q5SXM2 1469 aa17.04■□□□□ 0.32
TNMD-201ENST00000373031 TRHP20396 242 aaPredicted RBP17.04■□□□□ 0.32
TNMD-201ENST00000373031 MAGI1Q96QZ7 1491 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms