Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ANO2-201ENST00000327087 3720 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 GABRR1-207ENST00000621627 2857 ntTSL 5 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 TXNRD1-204ENST00000429002 3855 ntTSL 5 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 PCYT1B-203ENST00000379145 5307 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
NPIPA3F8WFD2 C5orf66-205ENST00000555438 3246 ntTSL 3 BASIC8.27□□□□□ -1.08
NPIPA3F8WFD2 ECD-203ENST00000430082 2246 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
NPIPA3F8WFD2 CA5B-204ENST00000454127 2205 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.08
NPIPA3F8WFD2 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
NPIPA3F8WFD2 AL353625.1-201ENST00000569097 3131 ntBASIC8.27□□□□□ -1.08
NPIPA3F8WFD2 NBPF19-203ENST00000578189 5034 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
NPIPA3F8WFD2 BTBD3-215ENST00000618918 4486 ntAPPRIS ALT1 TSL 4 BASIC8.27□□□□□ -1.08
NPIPA3F8WFD2 ABCE1-201ENST00000296577 3921 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
NPIPA3F8WFD2 LINC02245-201ENST00000449259 2928 ntTSL 5 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 TCF4-208ENST00000543082 2399 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 Z95114.3-201ENST00000624395 1921 ntBASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 LINC00933-201ENST00000557887 2606 ntTSL 2 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 KCTD19-201ENST00000304372 2958 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 DLSTP1-201ENST00000444241 1354 ntBASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 EYA3-201ENST00000373863 1729 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 LINC00705-201ENST00000417883 1745 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 AC016909.2-201ENST00000424510 1711 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 PDLIM5-207ENST00000503974 2081 ntTSL 2 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 AC240565.2-201ENST00000623180 2096 ntTSL 5 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 FTSJ3-201ENST00000427159 3559 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 PIK3R1-202ENST00000336483 2439 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 AP000769.1-204ENST00000309775 800 ntTSL 5 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 TNNT3-202ENST00000344578 794 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 RAB18-202ENST00000375802 617 ntTSL 5 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 COX17P1-201ENST00000378775 192 ntBASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 TNNT3-205ENST00000381563 844 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 SNORD83A-201ENST00000386747 95 ntBASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 TNNT3-209ENST00000397304 720 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 AC073610.3-201ENST00000398092 939 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 ZNF839P1-201ENST00000403487 861 ntBASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 AL590286.1-201ENST00000404178 291 ntBASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 RIMKLBP1-201ENST00000408914 1164 ntBASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 EPPIN-203ENST00000409554 998 ntTSL 5 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 RNA5SP203-201ENST00000410451 136 ntBASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 AL365226.2-201ENST00000418403 397 ntTSL 2 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 SPCS1-202ENST00000423431 822 ntTSL 3 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 AC113607.1-201ENST00000427019 589 ntTSL 4 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 TNNT3-210ENST00000446240 720 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 AL157714.1-201ENST00000448964 625 ntBASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 AL596188.1-201ENST00000452888 370 ntTSL 5 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 C3orf67-AS1-201ENST00000463703 562 ntTSL 4 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 ATXN7L1-208ENST00000478915 1115 ntTSL 3 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 AF131215.1-201ENST00000488887 520 ntBASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 RN7SL580P-201ENST00000492489 287 ntBASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 LINC02148-201ENST00000503877 1223 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 AC106799.2-201ENST00000507435 721 ntTSL 5 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 AC233724.16-201ENST00000510838 1201 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 AC114781.2-201ENST00000515670 394 ntTSL 3 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 AC011726.1-201ENST00000515686 669 ntBASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 AC044839.4-201ENST00000534128 469 ntTSL 3 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 PGA4-202ENST00000537932 840 ntTSL 2 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 PGA3-204ENST00000538258 867 ntTSL 2 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 ASB8-211ENST00000539528 839 ntTSL 3 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 PGA3-207ENST00000543125 968 ntTSL 2 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 PGA4-206ENST00000544899 867 ntTSL 2 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 LINC00520-204ENST00000556417 778 ntTSL 3 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 FAM222B-214ENST00000583953 564 ntTSL 4 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 AC063950.1-202ENST00000600133 568 ntBASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 OR12D2-206ENST00000623183 1069 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 LINC00595-215ENST00000635422 651 ntTSL 5 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 TNNT3-218ENST00000641787 924 ntAPPRIS ALT2 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 TBC1D8B-206ENST00000481617 4098 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 SMC1B-202ENST00000404354 3636 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 OVGP1-201ENST00000369732 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 SPATA7-202ENST00000356583 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 AC114689.1-201ENST00000578727 2484 ntBASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 AL022322.1-201ENST00000609162 1433 ntBASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 PABPC4L-201ENST00000421491 4944 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 ACLY-202ENST00000353196 4318 ntAPPRIS ALT1 TSL 5 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 RPGR-201ENST00000318842 3108 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 CICP22-201ENST00000432801 1319 ntBASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 POP4-202ENST00000585603 3385 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 PSG11-202ENST00000320078 1575 ntAPPRIS P2 TSL 2 BASIC8.27□□□□□ -1.09
NPIPA3F8WFD2 RNASE9-207ENST00000555230 2668 ntAPPRIS P3 TSL 2 BASIC8.26□□□□□ -1.09
NPIPA3F8WFD2 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
NPIPA3F8WFD2 RNF145-209ENST00000520638 2340 ntTSL 2 BASIC8.26□□□□□ -1.09
NPIPA3F8WFD2 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC8.26□□□□□ -1.09
NPIPA3F8WFD2 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC8.26□□□□□ -1.09
NPIPA3F8WFD2 ACSBG2-206ENST00000588485 2478 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
NPIPA3F8WFD2 TROVE2-204ENST00000367445 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
NPIPA3F8WFD2 RNPC3-201ENST00000423855 1872 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
NPIPA3F8WFD2 AC079062.1-201ENST00000584544 1396 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
NPIPA3F8WFD2 AL034417.4-201ENST00000641354 2101 ntBASIC8.26□□□□□ -1.09
NPIPA3F8WFD2 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
NPIPA3F8WFD2 POLR2D-201ENST00000272645 5042 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
NPIPA3F8WFD2 AC008870.1-201ENST00000566996 3009 ntTSL 2 BASIC8.26□□□□□ -1.09
NPIPA3F8WFD2 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
NPIPA3F8WFD2 AC092645.1-201ENST00000624058 2272 ntBASIC8.26□□□□□ -1.09
NPIPA3F8WFD2 RSL24D1-201ENST00000260443 2015 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
NPIPA3F8WFD2 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
NPIPA3F8WFD2 TNFAIP8-201ENST00000274456 795 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms