RNA–Protein interactions for RNA: ENST00000379145.5

PCYT1B-203, Transcript of phosphate cytidylyltransferase 1, choline, beta, humanhuman

TSL 1 (best) BASIC

Gene PCYT1B, Length 5,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1B-203ENST00000379145 NISCHQ9Y2I1 1504 aa16.25■□□□□ 0.19
PCYT1B-203ENST00000379145 PELP1Q8IZL8 1130 aaKnown RBP15.65■□□□□ 0.1
PCYT1B-203ENST00000379145 HRCP23327 699 aa15.61■□□□□ 0.09
PCYT1B-203ENST00000379145 SUPT5HO00267 1087 aaKnown RBP15.58■□□□□ 0.08
PCYT1B-203ENST00000379145 PCGF6Q9BYE7 350 aa15.57■□□□□ 0.08
PCYT1B-203ENST00000379145 PPARGC1BQ86YN6 1023 aaKnown RBP15.39■□□□□ 0.05
PCYT1B-203ENST00000379145 SHROOM4Q9ULL8 1493 aa15.39■□□□□ 0.05
PCYT1B-203ENST00000379145 MYT1Q01538 1121 aa15.2■□□□□ 0.02
PCYT1B-203ENST00000379145 DCAF8L2P0C7V8 631 aa15.15■□□□□ 0.02
PCYT1B-203ENST00000379145 ZEB1P37275 1124 aaPredicted RBP14.95□□□□□ -0.02
PCYT1B-203ENST00000379145 TRIM26Q12899 539 aaPredicted RBP14.85□□□□□ -0.03
PCYT1B-203ENST00000379145 CHIC1Q5VXU3 224 aa14.85□□□□□ -0.03
PCYT1B-203ENST00000379145 CENPBP07199 599 aaPredicted RBP14.82□□□□□ -0.04
PCYT1B-203ENST00000379145 SCAF1Q9H7N4 1312 aaKnown RBP14.81□□□□□ -0.04
PCYT1B-203ENST00000379145 LOC105371045A0A1W2PR82 267 aa14.73□□□□□ -0.05
PCYT1B-203ENST00000379145 EHMT2Q96KQ7 1210 aa14.72□□□□□ -0.05
PCYT1B-203ENST00000379145 GTF3C3Q9Y5Q9 886 aa14.62□□□□□ -0.07
PCYT1B-203ENST00000379145 ACIN1Q9UKV3 1341 aaKnown RBP14.58□□□□□ -0.08
PCYT1B-203ENST00000379145 MYO15BQ96JP2 1530 aa14.56□□□□□ -0.08
PCYT1B-203ENST00000379145 CCER1Q8TC90 406 aaPredicted RBP14.56□□□□□ -0.08
PCYT1B-203ENST00000379145 YTHDC1Q96MU7 727 aaKnown RBP14.56□□□□□ -0.08
PCYT1B-203ENST00000379145 FAM9AQ8IZU1 332 aaPredicted RBP14.54□□□□□ -0.08
PCYT1B-203ENST00000379145 NEUROD1Q13562 356 aa14.46□□□□□ -0.09
PCYT1B-203ENST00000379145 DCAF1Q9Y4B6 1507 aa14.43□□□□□ -0.1
PCYT1B-203ENST00000379145 DIEXFQ68CQ4 756 aaKnown RBP14.41□□□□□ -0.1
PCYT1B-203ENST00000379145 TTBK1Q5TCY1 1321 aaPredicted RBP14.37□□□□□ -0.11
PCYT1B-203ENST00000379145 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.34□□□□□ -0.11
PCYT1B-203ENST00000379145 TRIM41Q8WV44 630 aa14.31□□□□□ -0.12
PCYT1B-203ENST00000379145 CCDC180Q9P1Z9 1646 aa14.17□□□□□ -0.14
PCYT1B-203ENST00000379145 ERICH6Q7L0X2 663 aa14.02□□□□□ -0.16
PCYT1B-203ENST00000379145 ZNF316A6NFI3 1004 aaPredicted RBP14.01□□□□□ -0.17
PCYT1B-203ENST00000379145 BCL11AQ9H165 835 aa13.96□□□□□ -0.17
PCYT1B-203ENST00000379145 ANP32EQ9BTT0 268 aa13.89□□□□□ -0.19
PCYT1B-203ENST00000379145 NEFLP07196 543 aa13.87□□□□□ -0.19
PCYT1B-203ENST00000379145 BCANQ96GW7 911 aa13.87□□□□□ -0.19
PCYT1B-203ENST00000379145 MIER1Q8N108 512 aa13.86□□□□□ -0.19
PCYT1B-203ENST00000379145 APLP2Q06481 763 aa13.83□□□□□ -0.19
PCYT1B-203ENST00000379145 HNRNPUL2Q1KMD3 747 aaKnown RBP13.83□□□□□ -0.2
PCYT1B-203ENST00000379145 UBTFP17480 764 aaKnown RBP13.77□□□□□ -0.21
PCYT1B-203ENST00000379145 ZCCHC6Q5VYS8 1495 aaKnown RBP13.74□□□□□ -0.21
PCYT1B-203ENST00000379145 CLSPNQ9HAW4 1339 aa13.72□□□□□ -0.21
PCYT1B-203ENST00000379145 CSRNP3Q8WYN3 585 aa13.68□□□□□ -0.22
PCYT1B-203ENST00000379145 SUPT16HQ9Y5B9 1047 aaKnown RBP13.68□□□□□ -0.22
PCYT1B-203ENST00000379145 RANGAP1P46060 587 aaPredicted RBP13.67□□□□□ -0.22
PCYT1B-203ENST00000379145 TSHZ2Q9NRE2 1034 aa13.61□□□□□ -0.23
PCYT1B-203ENST00000379145 FKBP8Q14318 412 aa13.61□□□□□ -0.23
PCYT1B-203ENST00000379145 ITGAEP38570 1179 aa13.48□□□□□ -0.25
PCYT1B-203ENST00000379145 CDK11AQ9UQ88 783 aaPredicted RBP13.47□□□□□ -0.25
PCYT1B-203ENST00000379145 RTL5Q5HYW3 569 aaPredicted RBP13.42□□□□□ -0.26
PCYT1B-203ENST00000379145 RBM19Q9Y4C8 960 aaKnown RBP13.41□□□□□ -0.26
PCYT1B-203ENST00000379145 MYT1LQ9UL68 1186 aa13.36□□□□□ -0.27
PCYT1B-203ENST00000379145 PRKCSHP14314 528 aaPredicted RBP13.35□□□□□ -0.27
PCYT1B-203ENST00000379145 NBR1Q14596 966 aa13.34□□□□□ -0.27
PCYT1B-203ENST00000379145 TRIM52Q96A61 297 aa13.33□□□□□ -0.28
PCYT1B-203ENST00000379145 ANP32CO43423 234 aa13.3□□□□□ -0.28
PCYT1B-203ENST00000379145 DDX10Q13206 875 aaKnown RBP13.29□□□□□ -0.28
PCYT1B-203ENST00000379145 CEP162Q5TB80 1403 aa13.27□□□□□ -0.28
PCYT1B-203ENST00000379145 DEKP35659 375 aaKnown RBP13.27□□□□□ -0.29
PCYT1B-203ENST00000379145 RSF1Q96T23 1441 aaPredicted RBP13.27□□□□□ -0.29
PCYT1B-203ENST00000379145 IRX6P78412 446 aaPredicted RBP13.26□□□□□ -0.29
PCYT1B-203ENST00000379145 EIF5BO60841 1220 aaKnown RBP13.2□□□□□ -0.3
PCYT1B-203ENST00000379145 KCNH8Q96L42 1107 aa13.18□□□□□ -0.3
PCYT1B-203ENST00000379145 RTN4Q9NQC3 1192 aaKnown RBP13.17□□□□□ -0.3
PCYT1B-203ENST00000379145 ANP32AP39687 249 aaKnown RBP13.16□□□□□ -0.3
PCYT1B-203ENST00000379145 HNRNPUQ00839 825 aaKnown RBP eCLIP13.16□□□□□ -0.3
PCYT1B-203ENST00000379145 RB1CC1Q8TDY2 1594 aa13.13□□□□□ -0.31
PCYT1B-203ENST00000379145 ATP1B4Q9UN42 357 aaPredicted RBP13.13□□□□□ -0.31
PCYT1B-203ENST00000379145 HIRIP3Q9BW71 556 aaPredicted RBP13.12□□□□□ -0.31
PCYT1B-203ENST00000379145 TNIKQ9UKE5 1360 aa13.11□□□□□ -0.31
PCYT1B-203ENST00000379145 CNGB1Q14028 1251 aaPredicted RBP13.09□□□□□ -0.31
PCYT1B-203ENST00000379145 ANO8Q9HCE9 1232 aaPredicted RBP13.08□□□□□ -0.32
PCYT1B-203ENST00000379145 NOP58Q9Y2X3 529 aaKnown RBP13.08□□□□□ -0.32
PCYT1B-203ENST00000379145 ZBTB47Q9UFB7 747 aaPredicted RBP13.08□□□□□ -0.32
PCYT1B-203ENST00000379145 NPM2Q86SE8 214 aaKnown RBP13.07□□□□□ -0.32
PCYT1B-203ENST00000379145 DAXXQ9UER7 740 aaPredicted RBP13.07□□□□□ -0.32
PCYT1B-203ENST00000379145 SCRIBQ14160 1630 aa13.07□□□□□ -0.32
PCYT1B-203ENST00000379145 CCDC136Q96JN2 1154 aa13.06□□□□□ -0.32
PCYT1B-203ENST00000379145 WRNQ14191 1432 aaPredicted RBP eCLIP13.06□□□□□ -0.32
PCYT1B-203ENST00000379145 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.04□□□□□ -0.32
PCYT1B-203ENST00000379145 ABCC9O60706 1549 aa13.04□□□□□ -0.32
PCYT1B-203ENST00000379145 MSH5O43196 834 aa13.03□□□□□ -0.32
PCYT1B-203ENST00000379145 FAM50AQ14320 339 aaKnown RBP13.03□□□□□ -0.32
PCYT1B-203ENST00000379145 FANCIQ9NVI1 1328 aa13.03□□□□□ -0.32
PCYT1B-203ENST00000379145 CLIP1P30622 1438 aa13.01□□□□□ -0.33
PCYT1B-203ENST00000379145 PPP4R2Q9NY27 417 aa12.98□□□□□ -0.33
PCYT1B-203ENST00000379145 B4GALNT3Q6L9W6 998 aa12.98□□□□□ -0.33
PCYT1B-203ENST00000379145 GOLGA3Q08378 1498 aa12.98□□□□□ -0.33
PCYT1B-203ENST00000379145 POLR3GLQ9BT43 218 aa12.97□□□□□ -0.33
PCYT1B-203ENST00000379145 SOGA1O94964 1423 aa12.96□□□□□ -0.33
PCYT1B-203ENST00000379145 FAM9BQ8IZU0 186 aa12.96□□□□□ -0.33
PCYT1B-203ENST00000379145 ERICH6BQ5W0A0 696 aa12.95□□□□□ -0.34
PCYT1B-203ENST00000379145 SALL2Q9Y467 1007 aaPredicted RBP12.94□□□□□ -0.34
PCYT1B-203ENST00000379145 CCER2I3L3R5 266 aa12.92□□□□□ -0.34
PCYT1B-203ENST00000379145 DHX57Q6P158 1386 aaKnown RBP12.92□□□□□ -0.34
PCYT1B-203ENST00000379145 LAS1LQ9Y4W2 734 aaKnown RBP12.9□□□□□ -0.34
PCYT1B-203ENST00000379145 EEA1Q15075 1411 aa12.9□□□□□ -0.34
PCYT1B-203ENST00000379145 SIN3AQ96ST3 1273 aa12.9□□□□□ -0.34
PCYT1B-203ENST00000379145 CCDC88BA6NC98 1476 aa12.89□□□□□ -0.35
PCYT1B-203ENST00000379145 NEFMP07197 916 aa12.88□□□□□ -0.35
PCYT1B-203ENST00000379145 TONSLQ96HA7 1378 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms