Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.215e-7■■□□□ 14.4
PRPF8Q6P2Q9 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.285e-7■■□□□ 14.4
PRPF8Q6P2Q9 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.355e-7■■□□□ 14.4
PRPF8Q6P2Q9 RPS5-203ENST00000596314 718 ntTSL 512.66□□□□□ -0.385e-7■■□□□ 14.4
PRPF8Q6P2Q9 RPS5-204ENST00000598098 536 ntTSL 2 BASIC11.77□□□□□ -0.535e-7■■□□□ 14.4
PRPF8Q6P2Q9 RPS5-205ENST00000598495 800 ntTSL 3 BASIC11.09□□□□□ -0.635e-7■■□□□ 14.4
PRPF8Q6P2Q9 DKC1-210ENST00000481062 819 ntTSL 211.68□□□□□ -0.547e-10■■□□□ 14.4
PRPF8Q6P2Q9 MARK4-207ENST00000590909 594 ntTSL 510.74□□□□□ -0.693e-6■■□□□ 14.4
PRPF8Q6P2Q9 MAP2K2-203ENST00000593364 872 ntTSL 516.63■□□□□ 0.253e-7■■□□□ 14.4
PRPF8Q6P2Q9 MAP2K2-211ENST00000602167 431 ntTSL 513.25□□□□□ -0.293e-7■■□□□ 14.4
PRPF8Q6P2Q9 TGFBR3-205ENST00000468996 569 ntTSL 49.06□□□□□ -0.962e-9■■□□□ 14.4
PRPF8Q6P2Q9 EPS8L2-212ENST00000528770 2233 ntTSL 213.18□□□□□ -0.31e-14■■□□□ 14.4
PRPF8Q6P2Q9 HBS1L-215ENST00000529882 544 ntTSL 414.03□□□□□ -0.161e-8■■□□□ 14.4
PRPF8Q6P2Q9 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.84□□□□□ -0.351e-8■■□□□ 14.4
PRPF8Q6P2Q9 HBS1L-203ENST00000367822 2793 ntTSL 1 (best) BASIC9.22□□□□□ -0.931e-8■■□□□ 14.4
PRPF8Q6P2Q9 HBS1L-201ENST00000314674 980 ntTSL 5 BASIC9.16□□□□□ -0.941e-8■■□□□ 14.4
PRPF8Q6P2Q9 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC6.71□□□□□ -1.331e-8■■□□□ 14.4
PRPF8Q6P2Q9 VPS41-211ENST00000466017 591 ntTSL 44.37□□□□□ -1.711e-8■■□□□ 14.4
PRPF8Q6P2Q9 HBS1L-207ENST00000524715 551 ntTSL 42.21□□□□□ -2.061e-8■■□□□ 14.4
PRPF8Q6P2Q9 SEMA3B-205ENST00000434030 1011 ntTSL 319.01■□□□□ 0.633e-12■■□□□ 14.4
PRPF8Q6P2Q9 SEMA3B-206ENST00000439487 594 ntTSL 316.5■□□□□ 0.233e-12■■□□□ 14.4
PRPF8Q6P2Q9 NECAB3-217ENST00000606106 591 ntTSL 416.79■□□□□ 0.289e-10■■□□□ 14.4
PRPF8Q6P2Q9 RNASEH2A-203ENST00000590279 696 ntTSL 320.15■□□□□ 0.825e-7■■□□□ 14.4
PRPF8Q6P2Q9 RNASEH2A-202ENST00000590121 859 ntTSL 217.18■□□□□ 0.345e-7■■□□□ 14.4
PRPF8Q6P2Q9 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.015e-7■■□□□ 14.4
PRPF8Q6P2Q9 RNASEH2A-204ENST00000593017 1487 ntTSL 213.83□□□□□ -0.25e-7■■□□□ 14.4
PRPF8Q6P2Q9 RNASEH2A-205ENST00000639767 647 ntTSL 513.83□□□□□ -0.25e-7■■□□□ 14.4
PRPF8Q6P2Q9 C14orf80-220ENST00000551538 4437 ntTSL 213.46□□□□□ -0.252e-6■■□□□ 14.4
PRPF8Q6P2Q9 KAT7-209ENST00000509124 564 ntTSL 513.3□□□□□ -0.288e-8■■□□□ 14.4
PRPF8Q6P2Q9 AP2M1-218ENST00000480260 582 ntTSL 27.77□□□□□ -1.178e-7■■□□□ 14.4
PRPF8Q6P2Q9 SH3GL1-204ENST00000598219 619 ntTSL 36.68□□□□□ -1.342e-8■■□□□ 14.4
PRPF8Q6P2Q9 INTS3-210ENST00000512605 3442 ntTSL 2 BASIC7.62□□□□□ -1.192e-6■■□□□ 14.4
PRPF8Q6P2Q9 INTS3-205ENST00000476843 3404 ntTSL 1 (best)5.49□□□□□ -1.532e-6■■□□□ 14.4
PRPF8Q6P2Q9 TFR2-207ENST00000473374 891 ntTSL 519.01■□□□□ 0.632e-9■■□□□ 14.4
PRPF8Q6P2Q9 TFR2-208ENST00000473571 628 ntTSL 315.37■□□□□ 0.052e-9■■□□□ 14.4
PRPF8Q6P2Q9 TFR2-204ENST00000462090 1844 ntTSL 514.32□□□□□ -0.122e-9■■□□□ 14.4
PRPF8Q6P2Q9 TFR2-212ENST00000476304 2421 ntTSL 513.36□□□□□ -0.272e-9■■□□□ 14.4
PRPF8Q6P2Q9 TFR2-213ENST00000490084 2196 ntTSL 212.95□□□□□ -0.342e-9■■□□□ 14.4
PRPF8Q6P2Q9 ACAA1-216ENST00000480865 1540 ntTSL 512.63□□□□□ -0.392e-7■■□□□ 14.4
PRPF8Q6P2Q9 ACAA1-214ENST00000469559 4720 ntTSL 29.64□□□□□ -0.872e-7■■□□□ 14.4
PRPF8Q6P2Q9 A2M-210ENST00000542567 563 ntTSL 45.8□□□□□ -1.481e-323■■□□□ 14.4
PRPF8Q6P2Q9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC15.61■□□□□ 0.091e-7■■□□□ 14.4
PRPF8Q6P2Q9 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.071e-7■■□□□ 14.4
PRPF8Q6P2Q9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.47■□□□□ 0.076e-7■■□□□ 14.4
PRPF8Q6P2Q9 BRD2-218ENST00000606059 565 ntTSL 29.31□□□□□ -0.921e-10■■□□□ 14.4
PRPF8Q6P2Q9 AP3D1-210ENST00000591631 796 ntTSL 514.01□□□□□ -0.178e-8■■□□□ 14.4
PRPF8Q6P2Q9 ACIN1-218ENST00000555807 928 ntTSL 28.5□□□□□ -1.053e-11■■□□□ 14.4
PRPF8Q6P2Q9 ACIN1-220ENST00000557039 727 ntTSL 38.17□□□□□ -1.13e-11■■□□□ 14.4
PRPF8Q6P2Q9 APEX1-204ENST00000553368 304 ntTSL 313.12□□□□□ -0.312e-7■■□□□ 14.4
PRPF8Q6P2Q9 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC10.95□□□□□ -0.663e-6■■□□□ 14.4
PRPF8Q6P2Q9 APEX1-213ENST00000556296 571 ntTSL 410.93□□□□□ -0.662e-7■■□□□ 14.4
PRPF8Q6P2Q9 EHHADH-205ENST00000475987 568 ntTSL 410.38□□□□□ -0.753e-6■■□□□ 14.4
PRPF8Q6P2Q9 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.433e-6■■□□□ 14.4
PRPF8Q6P2Q9 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.45□□□□□ -2.183e-6■■□□□ 14.4
PRPF8Q6P2Q9 SYTL1-207ENST00000496001 876 ntTSL 518.01■□□□□ 0.475e-9■■□□□ 14.4
PRPF8Q6P2Q9 SYTL1-206ENST00000490170 2681 ntTSL 215.71■□□□□ 0.15e-9■■□□□ 14.4
PRPF8Q6P2Q9 GABBR1-203ENST00000377012 4104 ntTSL 1 (best) BASIC10.69□□□□□ -0.73e-7■■□□□ 14.4
PRPF8Q6P2Q9 GABBR1-201ENST00000355973 3506 ntTSL 2 BASIC9.41□□□□□ -0.93e-7■■□□□ 14.4
PRPF8Q6P2Q9 PANK2-203ENST00000464452 771 ntTSL 39.74□□□□□ -0.853e-7■■□□□ 14.4
PRPF8Q6P2Q9 PYCR1-213ENST00000584848 949 ntTSL 512.74□□□□□ -0.377e-8■■□□□ 14.4
PRPF8Q6P2Q9 FAM160B2-205ENST00000464226 891 ntTSL 314.37□□□□□ -0.112e-7■■□□□ 14.4
PRPF8Q6P2Q9 STAG2-207ENST00000394478 676 ntTSL 50.57□□□□□ -2.324e-10■■□□□ 14.4
PRPF8Q6P2Q9 GPR135-202ENST00000481661 2540 ntTSL 1 (best)17.85■□□□□ 0.458e-7■■□□□ 14.4
PRPF8Q6P2Q9 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.672e-7■■□□□ 14.4
PRPF8Q6P2Q9 UNC13D-202ENST00000412096 3648 ntTSL 2 BASIC10.27□□□□□ -0.772e-7■■□□□ 14.4
PRPF8Q6P2Q9 PLD1-211ENST00000471075 1773 ntTSL 26.96□□□□□ -1.39e-7■■□□□ 14.4
PRPF8Q6P2Q9 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC13.5□□□□□ -0.252e-9■■□□□ 14.4
PRPF8Q6P2Q9 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC13.41□□□□□ -0.262e-9■■□□□ 14.4
PRPF8Q6P2Q9 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.272e-9■■□□□ 14.4
PRPF8Q6P2Q9 RBCK1-209ENST00000415942 2613 ntTSL 512.88□□□□□ -0.352e-9■■□□□ 14.4
PRPF8Q6P2Q9 RBCK1-204ENST00000382214 2752 ntTSL 1 (best)12.71□□□□□ -0.372e-9■■□□□ 14.4
PRPF8Q6P2Q9 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC11.87□□□□□ -0.512e-9■■□□□ 14.4
PRPF8Q6P2Q9 LAMA5-208ENST00000474128 579 ntTSL 315.12■□□□□ 0.014e-11■■□□□ 14.4
PRPF8Q6P2Q9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.36□□□□□ -0.119e-8■■□□□ 14.4
PRPF8Q6P2Q9 MAN1B1-203ENST00000474902 2336 ntTSL 211.06□□□□□ -0.649e-8■■□□□ 14.4
PRPF8Q6P2Q9 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.689e-8■■□□□ 14.4
PRPF8Q6P2Q9 MAN1B1-213ENST00000544448 2090 ntTSL 1 (best)9.87□□□□□ -0.839e-8■■□□□ 14.4
PRPF8Q6P2Q9 CSNK1G3-204ENST00000508708 920 ntTSL 220.05■□□□□ 0.89e-14■■□□□ 14.4
PRPF8Q6P2Q9 MICALL2-210ENST00000482839 852 ntTSL 213.02□□□□□ -0.339e-14■■□□□ 14.4
PRPF8Q6P2Q9 MICALL2-213ENST00000490608 631 ntTSL 212.65□□□□□ -0.389e-14■■□□□ 14.4
PRPF8Q6P2Q9 FCHSD2-206ENST00000422375 587 ntTSL 411.02□□□□□ -0.651e-6■■□□□ 14.4
PRPF8Q6P2Q9 EPS8L2-215ENST00000530093 414 ntTSL 419.77■□□□□ 0.768e-20■■□□□ 14.4
PRPF8Q6P2Q9 EPS8L2-210ENST00000527807 814 ntTSL 519.11■□□□□ 0.658e-20■■□□□ 14.4
PRPF8Q6P2Q9 EPS8L2-229ENST00000534755 474 ntTSL 418.28■□□□□ 0.528e-20■■□□□ 14.4
PRPF8Q6P2Q9 EPS8L2-224ENST00000533500 587 ntTSL 318.2■□□□□ 0.58e-20■■□□□ 14.4
PRPF8Q6P2Q9 EPS8L2-203ENST00000524763 580 ntTSL 316.25■□□□□ 0.198e-20■■□□□ 14.4
PRPF8Q6P2Q9 SNX17-208ENST00000493711 583 ntTSL 310.05□□□□□ -0.87e-9■■□□□ 14.4
PRPF8Q6P2Q9 FGFR3-209ENST00000507588 336 ntTSL 1 (best)16.31■□□□□ 0.23e-20■■□□□ 14.4
PRPF8Q6P2Q9 AMT-223ENST00000635798 1276 ntTSL 510.06□□□□□ -0.87e-7■■□□□ 14.4
PRPF8Q6P2Q9 AMT-226ENST00000635907 876 ntTSL 510.04□□□□□ -0.87e-7■■□□□ 14.4
PRPF8Q6P2Q9 EARS2-202ENST00000561859 518 ntTSL 415.61■□□□□ 0.092e-6■■□□□ 14.4
PRPF8Q6P2Q9 EARS2-205ENST00000562799 559 ntTSL 415.61■□□□□ 0.092e-6■■□□□ 14.4
PRPF8Q6P2Q9 EARS2-208ENST00000563499 556 ntTSL 514.76□□□□□ -0.052e-6■■□□□ 14.4
PRPF8Q6P2Q9 EARS2-204ENST00000562581 533 ntTSL 514.07□□□□□ -0.162e-6■■□□□ 14.4
PRPF8Q6P2Q9 EARS2-215ENST00000564997 572 ntTSL 513.22□□□□□ -0.292e-6■■□□□ 14.4
PRPF8Q6P2Q9 EARS2-211ENST00000564668 627 ntTSL 413.15□□□□□ -0.32e-6■■□□□ 14.4
PRPF8Q6P2Q9 SFI1-227ENST00000495107 735 ntTSL 311.85□□□□□ -0.512e-8■■□□□ 14.4
PRPF8Q6P2Q9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.152e-7■■□□□ 14.4
PRPF8Q6P2Q9 DDX3X-210ENST00000615313 568 ntTSL 416.4■□□□□ 0.224e-11■■□□□ 14.4
PRPF8Q6P2Q9 DDX3X-208ENST00000611546 442 ntTSL 514.35□□□□□ -0.114e-11■■□□□ 14.4
Retrieved 100 of 73,762 protein–RNA pairs in 1700.2 ms