Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SFXN2-201ENST00000369893 6866 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 MUC20-204ENST00000445522 2842 ntAPPRIS ALT2 TSL 2 BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 PDP2-201ENST00000311765 7146 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 ESPL1-201ENST00000257934 6623 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 LACTB2-AS1-201ENST00000499227 3716 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 PSG11-202ENST00000320078 1575 ntAPPRIS P2 TSL 2 BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 ZNF207-204ENST00000394673 2124 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 CTDSPL2-201ENST00000260327 6828 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 LINC00410-201ENST00000419272 2018 ntTSL 2 BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 TRIM64FP-201ENST00000427305 1371 ntBASIC9.55□□□□□ -0.88
LMO3Q8TAP4 DEFA5-201ENST00000330590 449 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 AL133343.1-201ENST00000375670 846 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 BPHL-202ENST00000380375 1050 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 OSBPL10-AS1-201ENST00000417313 475 ntTSL 3 BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 MTAPP2-201ENST00000437063 832 ntBASIC9.55□□□□□ -0.88
LMO3Q8TAP4 NPM1P51-201ENST00000443470 744 ntBASIC9.55□□□□□ -0.88
LMO3Q8TAP4 RPL7AP8-201ENST00000481963 804 ntBASIC9.55□□□□□ -0.88
LMO3Q8TAP4 HNRNPA1P20-201ENST00000484852 955 ntBASIC9.55□□□□□ -0.88
LMO3Q8TAP4 C2orf74-205ENST00000488469 1070 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 CASP12-211ENST00000508062 774 ntTSL 5 BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 AL645949.1-201ENST00000510094 324 ntBASIC9.55□□□□□ -0.88
LMO3Q8TAP4 AC124290.2-201ENST00000519431 286 ntBASIC9.55□□□□□ -0.88
LMO3Q8TAP4 AP002812.5-201ENST00000530972 712 ntTSL 2 BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 CCND2P1-201ENST00000539268 799 ntBASIC9.55□□□□□ -0.88
LMO3Q8TAP4 AL137230.2-201ENST00000555070 452 ntTSL 3 BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 WDR61-202ENST00000558311 1266 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 AC011767.1-203ENST00000559762 529 ntTSL 5 BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 AC037198.1-201ENST00000560769 281 ntTSL 3 BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 snoZ6.4-201ENST00000581669 55 ntBASIC9.55□□□□□ -0.88
LMO3Q8TAP4 AC018697.1-202ENST00000582650 592 ntTSL 4 BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 FAM95B1-209ENST00000590863 789 ntTSL 2 BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 uc_338.27-201ENST00000611385 169 ntBASIC9.55□□□□□ -0.88
LMO3Q8TAP4 AP003072.3-201ENST00000623456 594 ntBASIC9.55□□□□□ -0.88
LMO3Q8TAP4 ADH1C-204ENST00000515683 1740 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 WISP3-202ENST00000361714 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 SYT11-201ENST00000368324 5240 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 HAUS6-201ENST00000380496 3756 ntTSL 2 BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 CEP68-205ENST00000537589 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 DNAL1-201ENST00000311089 2312 ntTSL 2 BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 GFOD2-202ENST00000602279 5507 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 ENTPD1-AS1-211ENST00000454638 2933 ntTSL 2 BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 SEC24C-202ENST00000345254 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 NXF5-205ENST00000473265 1348 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 KPNB1-202ENST00000535458 3163 ntTSL 2 BASIC9.55□□□□□ -0.88
LMO3Q8TAP4 MCM8-204ENST00000378896 3769 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 NWD1-205ENST00000549814 6614 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 GIN1-201ENST00000399004 3229 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 DPF3-215ENST00000610283 4520 ntTSL 2 BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 CDH13-210ENST00000567445 1456 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 KEL-201ENST00000355265 2812 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 PARP6-201ENST00000260376 2142 ntTSL 5 BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 ATP5I-201ENST00000304312 365 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 TAGAP-202ENST00000338313 1183 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 VTRNA1-2-201ENST00000365241 89 ntBASIC9.54□□□□□ -0.88
LMO3Q8TAP4 SNORA7.3-201ENST00000384186 139 ntBASIC9.54□□□□□ -0.88
LMO3Q8TAP4 AL356273.2-201ENST00000413701 973 ntBASIC9.54□□□□□ -0.88
LMO3Q8TAP4 AC103563.8-201ENST00000415716 318 ntBASIC9.54□□□□□ -0.88
LMO3Q8TAP4 LINC02090-201ENST00000419151 400 ntTSL 3 BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 AC022398.1-201ENST00000441001 510 ntTSL 5 BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 AC006463.1-201ENST00000445929 232 ntBASIC9.54□□□□□ -0.88
LMO3Q8TAP4 AL357127.1-201ENST00000451295 438 ntTSL 3 BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 RN7SL761P-201ENST00000463259 278 ntBASIC9.54□□□□□ -0.88
LMO3Q8TAP4 RN7SL35P-201ENST00000466169 292 ntBASIC9.54□□□□□ -0.88
LMO3Q8TAP4 IAH1-205ENST00000482918 863 ntTSL 3 BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 FAM107B-228ENST00000496330 697 ntAPPRIS P1 TSL 4 BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 AC104063.1-201ENST00000504840 702 ntTSL 3 BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 AC026704.1-201ENST00000506435 770 ntTSL 3 BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 AC106794.2-201ENST00000513713 632 ntBASIC9.54□□□□□ -0.88
LMO3Q8TAP4 AC023403.1-202ENST00000521139 759 ntTSL 3 BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 MRVI1-AS1-201ENST00000525578 829 ntTSL 3 BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 LRTOMT-216ENST00000539271 570 ntTSL 4 BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 AC063947.2-201ENST00000547000 1256 ntBASIC9.54□□□□□ -0.88
LMO3Q8TAP4 CHURC1-202ENST00000548752 439 ntTSL 2 BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 AC083805.2-201ENST00000549683 610 ntTSL 2 BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 AL355916.3-201ENST00000556347 779 ntAPPRIS P1 TSL 4 BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 AC007907.1-201ENST00000557953 451 ntTSL 3 BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 LINGO1-AS1-202ENST00000558887 1124 ntTSL 2 BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 HNRNPCP3-201ENST00000560385 875 ntBASIC9.54□□□□□ -0.88
LMO3Q8TAP4 AC127029.1-201ENST00000560822 237 ntBASIC9.54□□□□□ -0.88
LMO3Q8TAP4 ZRANB2-AS2-206ENST00000583678 551 ntTSL 4 BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 AC006504.5-211ENST00000588636 576 ntTSL 4 BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 AC078802.1-201ENST00000602879 843 ntTSL 4 BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 ARID1A-209ENST00000615191 3804 ntTSL 5 BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 LINC01320-214ENST00000627935 916 ntTSL 5 BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 MATN2-208ENST00000520016 3495 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 CASP3-206ENST00000523916 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 MIR3976HG-202ENST00000566533 1690 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 S1PR3-202ENST00000375846 8505 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 CLUAP1-212ENST00000576634 4163 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 ARMCX5-GPRASP2-206ENST00000476910 1848 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 APOL1-203ENST00000397279 1564 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 DSCAML1-201ENST00000321322 6899 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 DRAIC-201ENST00000498938 1345 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 STEAP3-AS1-201ENST00000454260 3218 ntTSL 2 BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 CDH7-202ENST00000397968 12231 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 CRTAM-201ENST00000227348 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 ERMAP-202ENST00000372514 3369 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
LMO3Q8TAP4 OTUD7B-202ENST00000581312 8872 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LMO3Q8TAP4 MYO6-207ENST00000615563 4026 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
LMO3Q8TAP4 ZNHIT6-202ENST00000431532 6080 ntTSL 2 BASIC9.53□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms