RNA–Protein interactions for RNA: ENST00000560385.2

HNRNPCP3-201, Transcript of heterogeneous nuclear ribonucleoprotein C pseudogene 3, humanhuman

BASIC

Gene HNRNPCP3, Length 875 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCP3-201ENST00000560385 CHIC1Q5VXU3 224 aa23.15■■□□□ 1.3
HNRNPCP3-201ENST00000560385 AEBP2Q6ZN18 517 aaPredicted RBP22.61■■□□□ 1.21
HNRNPCP3-201ENST00000560385 PHF23Q9BUL5 403 aaPredicted RBP20.38■□□□□ 0.85
HNRNPCP3-201ENST00000560385 NISCHQ9Y2I1 1504 aa20.08■□□□□ 0.81
HNRNPCP3-201ENST00000560385 PLPPR3Q6T4P5 718 aa19.29■□□□□ 0.68
HNRNPCP3-201ENST00000560385 SENP3Q9H4L4 574 aaPredicted RBP19.18■□□□□ 0.66
HNRNPCP3-201ENST00000560385 ADRA2BP18089 450 aa17.87■□□□□ 0.45
HNRNPCP3-201ENST00000560385 KCNA4P22459 653 aa17.74■□□□□ 0.43
HNRNPCP3-201ENST00000560385 EHMT2Q96KQ7 1210 aa17.7■□□□□ 0.42
HNRNPCP3-201ENST00000560385 PPP6R1Q9UPN7 881 aa17.64■□□□□ 0.41
HNRNPCP3-201ENST00000560385 CCDC180Q9P1Z9 1646 aa17.58■□□□□ 0.41
HNRNPCP3-201ENST00000560385 FOXD1Q16676 465 aa17.58■□□□□ 0.4
HNRNPCP3-201ENST00000560385 SLC4A1APQ9BWU0 796 aaKnown RBP17.13■□□□□ 0.33
HNRNPCP3-201ENST00000560385 PPP4R3CPQ6ZMV5 832 aa17.07■□□□□ 0.32
HNRNPCP3-201ENST00000560385 CSRNP3Q8WYN3 585 aa17.06■□□□□ 0.32
HNRNPCP3-201ENST00000560385 NCBP3Q53F19 620 aaKnown RBP17.02■□□□□ 0.32
HNRNPCP3-201ENST00000560385 ZCCHC6Q5VYS8 1495 aaKnown RBP16.87■□□□□ 0.29
HNRNPCP3-201ENST00000560385 PIAS4Q8N2W9 510 aaPredicted RBP16.86■□□□□ 0.29
HNRNPCP3-201ENST00000560385 DCAF1Q9Y4B6 1507 aa16.74■□□□□ 0.27
HNRNPCP3-201ENST00000560385 NPM3O75607 178 aaKnown RBP16.64■□□□□ 0.25
HNRNPCP3-201ENST00000560385 MYO15BQ96JP2 1530 aa16.6■□□□□ 0.25
HNRNPCP3-201ENST00000560385 ABCC9O60706 1549 aa16.49■□□□□ 0.23
HNRNPCP3-201ENST00000560385 CNKSR2Q8WXI2 1034 aa16.42■□□□□ 0.22
HNRNPCP3-201ENST00000560385 NACADO15069 1562 aa16.4■□□□□ 0.22
HNRNPCP3-201ENST00000560385 DCAF8L2P0C7V8 631 aa16.38■□□□□ 0.21
HNRNPCP3-201ENST00000560385 SCAF1Q9H7N4 1312 aaKnown RBP16.38■□□□□ 0.21
HNRNPCP3-201ENST00000560385 ZBTB22O15209 634 aa16.28■□□□□ 0.2
HNRNPCP3-201ENST00000560385 RB1CC1Q8TDY2 1594 aa16.23■□□□□ 0.19
HNRNPCP3-201ENST00000560385 DNAJC5BQ9UF47 199 aa16.13■□□□□ 0.17
HNRNPCP3-201ENST00000560385 FOXD4L1Q9NU39 408 aa16.12■□□□□ 0.17
HNRNPCP3-201ENST00000560385 SHROOM4Q9ULL8 1493 aa16.1■□□□□ 0.17
HNRNPCP3-201ENST00000560385 SCRIBQ14160 1630 aa15.99■□□□□ 0.15
HNRNPCP3-201ENST00000560385 MSH5O43196 834 aa15.94■□□□□ 0.14
HNRNPCP3-201ENST00000560385 SLC24A1O60721 1099 aa15.87■□□□□ 0.13
HNRNPCP3-201ENST00000560385 RNF216Q9NWF9 866 aaPredicted RBP15.86■□□□□ 0.13
HNRNPCP3-201ENST00000560385 AMER1Q5JTC6 1135 aaPredicted RBP15.84■□□□□ 0.13
HNRNPCP3-201ENST00000560385 UNC13AQ9UPW8 1703 aa15.76■□□□□ 0.11
HNRNPCP3-201ENST00000560385 MAPK8IP2Q13387 824 aaPredicted RBP15.74■□□□□ 0.11
HNRNPCP3-201ENST00000560385 RTN4Q9NQC3 1192 aaKnown RBP15.7■□□□□ 0.1
HNRNPCP3-201ENST00000560385 BICRAQ9NZM4 1560 aa15.67■□□□□ 0.1
HNRNPCP3-201ENST00000560385 ATXN8OSP0DMR3 200 aa15.54■□□□□ 0.08
HNRNPCP3-201ENST00000560385 BAZ1AQ9NRL2 1556 aaPredicted RBP15.53■□□□□ 0.08
HNRNPCP3-201ENST00000560385 RSF1Q96T23 1441 aaPredicted RBP15.53■□□□□ 0.08
HNRNPCP3-201ENST00000560385 SUPT5HO00267 1087 aaKnown RBP15.51■□□□□ 0.07
HNRNPCP3-201ENST00000560385 HOXD11P31277 338 aaPredicted RBP15.51■□□□□ 0.07
HNRNPCP3-201ENST00000560385 CECR2Q9BXF3 1484 aa15.51■□□□□ 0.07
HNRNPCP3-201ENST00000560385 PABPN1Q86U42 306 aaKnown RBP eCLIP15.49■□□□□ 0.07
HNRNPCP3-201ENST00000560385 SLC4A2P04920 1241 aa15.44■□□□□ 0.06
HNRNPCP3-201ENST00000560385 MROH2BQ7Z745 1585 aa15.44■□□□□ 0.06
HNRNPCP3-201ENST00000560385 DMRT2Q9Y5R5 561 aa15.43■□□□□ 0.06
HNRNPCP3-201ENST00000560385 MYCNP04198 464 aaPredicted RBP15.42■□□□□ 0.06
HNRNPCP3-201ENST00000560385 SMARCA4P51532 1647 aa15.42■□□□□ 0.06
HNRNPCP3-201ENST00000560385 FKBP8Q14318 412 aa15.39■□□□□ 0.05
HNRNPCP3-201ENST00000560385 PEG3Q9GZU2 1588 aa15.33■□□□□ 0.05
HNRNPCP3-201ENST00000560385 WIZO95785 1651 aa15.26■□□□□ 0.03
HNRNPCP3-201ENST00000560385 SMARCA2P51531 1590 aa15.24■□□□□ 0.03
HNRNPCP3-201ENST00000560385 EIF4G1Q04637 1599 aaKnown RBP15.23■□□□□ 0.03
HNRNPCP3-201ENST00000560385 TOP2AP11388 1531 aaKnown RBP15.22■□□□□ 0.03
HNRNPCP3-201ENST00000560385 ATAD2BQ9ULI0 1458 aa15.2■□□□□ 0.02
HNRNPCP3-201ENST00000560385 NCAPD3P42695 1498 aa15.14■□□□□ 0.01
HNRNPCP3-201ENST00000560385 HMGXB3Q12766 1538 aa15.12■□□□□ 0.01
HNRNPCP3-201ENST00000560385 BAZ1BQ9UIG0 1483 aaKnown RBP15.09■□□□□ 0.01
HNRNPCP3-201ENST00000560385 CCDC88BA6NC98 1476 aa15.01□□□□□ -0.01
HNRNPCP3-201ENST00000560385 CC2D2AQ9P2K1 1620 aa14.97□□□□□ -0.01
HNRNPCP3-201ENST00000560385 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.91□□□□□ -0.02
HNRNPCP3-201ENST00000560385 HNRNPUL2Q1KMD3 747 aaKnown RBP14.91□□□□□ -0.02
HNRNPCP3-201ENST00000560385 SAMD1Q6SPF0 538 aaPredicted RBP14.87□□□□□ -0.03
HNRNPCP3-201ENST00000560385 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.79□□□□□ -0.04
HNRNPCP3-201ENST00000560385 ATF5Q9Y2D1 282 aaPredicted RBP14.79□□□□□ -0.04
HNRNPCP3-201ENST00000560385 CFTRP13569 1480 aa14.76□□□□□ -0.05
HNRNPCP3-201ENST00000560385 CADPSQ9ULU8 1353 aa14.71□□□□□ -0.06
HNRNPCP3-201ENST00000560385 TRIM41Q8WV44 630 aa14.7□□□□□ -0.06
HNRNPCP3-201ENST00000560385 FBXO3Q9UK99 471 aa14.7□□□□□ -0.06
HNRNPCP3-201ENST00000560385 DCAF8L1A6NGE4 600 aa14.69□□□□□ -0.06
HNRNPCP3-201ENST00000560385 PRDM2Q13029 1718 aa14.63□□□□□ -0.07
HNRNPCP3-201ENST00000560385 WRNQ14191 1432 aaPredicted RBP eCLIP14.63□□□□□ -0.07
HNRNPCP3-201ENST00000560385 LAMC3Q9Y6N6 1575 aa14.61□□□□□ -0.07
HNRNPCP3-201ENST00000560385 U3KPZ7 1027 aaPredicted RBP14.6□□□□□ -0.07
HNRNPCP3-201ENST00000560385 ABCC8Q09428 1581 aa14.59□□□□□ -0.07
HNRNPCP3-201ENST00000560385 APLP2Q06481 763 aa14.56□□□□□ -0.08
HNRNPCP3-201ENST00000560385 ZNF219Q9P2Y4 722 aaPredicted RBP14.55□□□□□ -0.08
HNRNPCP3-201ENST00000560385 PLCB2Q00722 1185 aa14.53□□□□□ -0.08
HNRNPCP3-201ENST00000560385 TOP2BQ02880 1626 aa14.52□□□□□ -0.08
HNRNPCP3-201ENST00000560385 BIVM-ERCC5R4GMW8 1640 aa14.51□□□□□ -0.09
HNRNPCP3-201ENST00000560385 SYNJ1O43426 1573 aa14.51□□□□□ -0.09
HNRNPCP3-201ENST00000560385 EEA1Q15075 1411 aa14.5□□□□□ -0.09
HNRNPCP3-201ENST00000560385 PDS5BQ9NTI5 1447 aa14.5□□□□□ -0.09
HNRNPCP3-201ENST00000560385 FANCD2Q9BXW9 1451 aa14.5□□□□□ -0.09
HNRNPCP3-201ENST00000560385 SPDYE4A6NLX3 237 aa14.47□□□□□ -0.09
HNRNPCP3-201ENST00000560385 CUX1P39880 1505 aa14.45□□□□□ -0.1
HNRNPCP3-201ENST00000560385 NESP48681 1621 aa14.44□□□□□ -0.1
HNRNPCP3-201ENST00000560385 CEP164Q9UPV0 1460 aa14.43□□□□□ -0.1
HNRNPCP3-201ENST00000560385 DNMBPQ6XZF7 1577 aa14.39□□□□□ -0.11
HNRNPCP3-201ENST00000560385 VASPP50552 380 aaPredicted RBP14.38□□□□□ -0.11
HNRNPCP3-201ENST00000560385 PROM2Q8N271 834 aa14.37□□□□□ -0.11
HNRNPCP3-201ENST00000560385 SOGA1O94964 1423 aa14.35□□□□□ -0.11
HNRNPCP3-201ENST00000560385 TOPBP1Q92547 1522 aa14.34□□□□□ -0.11
HNRNPCP3-201ENST00000560385 HAP1P54257 671 aaPredicted RBP14.31□□□□□ -0.12
HNRNPCP3-201ENST00000560385 FGD5Q6ZNL6 1462 aa14.31□□□□□ -0.12
HNRNPCP3-201ENST00000560385 KIF27Q86VH2 1401 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms