Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SPCS1Q9Y6A9 AC020907.5-201ENST00000624372 1936 ntBASIC14.12□□□□□ -0.15
SPCS1Q9Y6A9 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SPCS1Q9Y6A9 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS1Q9Y6A9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.12□□□□□ -0.15
SPCS1Q9Y6A9 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS1Q9Y6A9 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC14.12□□□□□ -0.15
SPCS1Q9Y6A9 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SPCS1Q9Y6A9 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS1Q9Y6A9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS1Q9Y6A9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.12□□□□□ -0.15
SPCS1Q9Y6A9 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS1Q9Y6A9 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS1Q9Y6A9 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.12□□□□□ -0.15
SPCS1Q9Y6A9 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPCS1Q9Y6A9 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SPCS1Q9Y6A9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS1Q9Y6A9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS1Q9Y6A9 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS1Q9Y6A9 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS1Q9Y6A9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS1Q9Y6A9 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS1Q9Y6A9 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS1Q9Y6A9 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS1Q9Y6A9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS1Q9Y6A9 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC14.11□□□□□ -0.15
SPCS1Q9Y6A9 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC14.11□□□□□ -0.15
SPCS1Q9Y6A9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS1Q9Y6A9 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS1Q9Y6A9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS1Q9Y6A9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS1Q9Y6A9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS1Q9Y6A9 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS1Q9Y6A9 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC14.11□□□□□ -0.15
SPCS1Q9Y6A9 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS1Q9Y6A9 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS1Q9Y6A9 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
SPCS1Q9Y6A9 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPCS1Q9Y6A9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC14.11□□□□□ -0.15
SPCS1Q9Y6A9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS1Q9Y6A9 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.1□□□□□ -0.15
SPCS1Q9Y6A9 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC14.1□□□□□ -0.15
SPCS1Q9Y6A9 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SPCS1Q9Y6A9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
SPCS1Q9Y6A9 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS1Q9Y6A9 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
SPCS1Q9Y6A9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SPCS1Q9Y6A9 PKD1P5-201ENST00000532415 10291 ntBASIC14.1□□□□□ -0.15
SPCS1Q9Y6A9 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS1Q9Y6A9 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS1Q9Y6A9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS1Q9Y6A9 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS1Q9Y6A9 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS1Q9Y6A9 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS1Q9Y6A9 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SPCS1Q9Y6A9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS1Q9Y6A9 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS1Q9Y6A9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.1□□□□□ -0.15
SPCS1Q9Y6A9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS1Q9Y6A9 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS1Q9Y6A9 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS1Q9Y6A9 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC14.1□□□□□ -0.15
SPCS1Q9Y6A9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC14.1□□□□□ -0.15
SPCS1Q9Y6A9 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS1Q9Y6A9 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SPCS1Q9Y6A9 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS1Q9Y6A9 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
SPCS1Q9Y6A9 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SPCS1Q9Y6A9 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS1Q9Y6A9 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS1Q9Y6A9 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS1Q9Y6A9 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC14.09□□□□□ -0.15
SPCS1Q9Y6A9 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS1Q9Y6A9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
SPCS1Q9Y6A9 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SPCS1Q9Y6A9 AC005332.7-201ENST00000614046 2005 ntBASIC14.09□□□□□ -0.15
SPCS1Q9Y6A9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS1Q9Y6A9 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SPCS1Q9Y6A9 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS1Q9Y6A9 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS1Q9Y6A9 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SPCS1Q9Y6A9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS1Q9Y6A9 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS1Q9Y6A9 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS1Q9Y6A9 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS1Q9Y6A9 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
SPCS1Q9Y6A9 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SPCS1Q9Y6A9 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC14.08□□□□□ -0.15
SPCS1Q9Y6A9 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS1Q9Y6A9 NFIC-211ENST00000641145 8399 ntBASIC14.08□□□□□ -0.16
SPCS1Q9Y6A9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC14.08□□□□□ -0.16
SPCS1Q9Y6A9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.08□□□□□ -0.16
SPCS1Q9Y6A9 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.08□□□□□ -0.16
SPCS1Q9Y6A9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC14.08□□□□□ -0.16
SPCS1Q9Y6A9 AC099778.1-201ENST00000568593 1911 ntBASIC14.08□□□□□ -0.16
SPCS1Q9Y6A9 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS1Q9Y6A9 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC14.08□□□□□ -0.16
SPCS1Q9Y6A9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
SPCS1Q9Y6A9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS1Q9Y6A9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms