Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
CYP46A1Q9Y6A2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC24.33■■□□□ 1.49
CYP46A1Q9Y6A2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CYP46A1Q9Y6A2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC24.33■■□□□ 1.49
CYP46A1Q9Y6A2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CYP46A1Q9Y6A2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CYP46A1Q9Y6A2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.33■■□□□ 1.49
CYP46A1Q9Y6A2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CYP46A1Q9Y6A2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CYP46A1Q9Y6A2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CYP46A1Q9Y6A2 MIR6821-201ENST00000617625 74 ntBASIC24.33■■□□□ 1.49
CYP46A1Q9Y6A2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC24.33■■□□□ 1.49
CYP46A1Q9Y6A2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
CYP46A1Q9Y6A2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
CYP46A1Q9Y6A2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
CYP46A1Q9Y6A2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC24.33■■□□□ 1.48
CYP46A1Q9Y6A2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CYP46A1Q9Y6A2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CYP46A1Q9Y6A2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CYP46A1Q9Y6A2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CYP46A1Q9Y6A2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CYP46A1Q9Y6A2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
CYP46A1Q9Y6A2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CYP46A1Q9Y6A2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CYP46A1Q9Y6A2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CYP46A1Q9Y6A2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC24.32■■□□□ 1.48
CYP46A1Q9Y6A2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CYP46A1Q9Y6A2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.32■■□□□ 1.48
CYP46A1Q9Y6A2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.32■■□□□ 1.48
CYP46A1Q9Y6A2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
CYP46A1Q9Y6A2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CYP46A1Q9Y6A2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC24.32■■□□□ 1.48
CYP46A1Q9Y6A2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CYP46A1Q9Y6A2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
CYP46A1Q9Y6A2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CYP46A1Q9Y6A2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CYP46A1Q9Y6A2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CYP46A1Q9Y6A2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CYP46A1Q9Y6A2 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CYP46A1Q9Y6A2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CYP46A1Q9Y6A2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
CYP46A1Q9Y6A2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC24.31■■□□□ 1.48
CYP46A1Q9Y6A2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC24.31■■□□□ 1.48
CYP46A1Q9Y6A2 AC087623.3-201ENST00000607047 1098 ntBASIC24.31■■□□□ 1.48
CYP46A1Q9Y6A2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
CYP46A1Q9Y6A2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CYP46A1Q9Y6A2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
CYP46A1Q9Y6A2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC24.31■■□□□ 1.48
CYP46A1Q9Y6A2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.3■■□□□ 1.48
CYP46A1Q9Y6A2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC24.3■■□□□ 1.48
CYP46A1Q9Y6A2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CYP46A1Q9Y6A2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC24.3■■□□□ 1.48
CYP46A1Q9Y6A2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC24.3■■□□□ 1.48
CYP46A1Q9Y6A2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
CYP46A1Q9Y6A2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC24.3■■□□□ 1.48
CYP46A1Q9Y6A2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC24.3■■□□□ 1.48
CYP46A1Q9Y6A2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CYP46A1Q9Y6A2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC24.3■■□□□ 1.48
CYP46A1Q9Y6A2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CYP46A1Q9Y6A2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CYP46A1Q9Y6A2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CYP46A1Q9Y6A2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CYP46A1Q9Y6A2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC24.3■■□□□ 1.48
CYP46A1Q9Y6A2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC24.3■■□□□ 1.48
CYP46A1Q9Y6A2 MIR2861-201ENST00000636310 90 ntBASIC24.3■■□□□ 1.48
CYP46A1Q9Y6A2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CYP46A1Q9Y6A2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CYP46A1Q9Y6A2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
CYP46A1Q9Y6A2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC24.3■■□□□ 1.48
CYP46A1Q9Y6A2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CYP46A1Q9Y6A2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
CYP46A1Q9Y6A2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
CYP46A1Q9Y6A2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CYP46A1Q9Y6A2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CYP46A1Q9Y6A2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CYP46A1Q9Y6A2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
CYP46A1Q9Y6A2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.29■■□□□ 1.48
CYP46A1Q9Y6A2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC24.29■■□□□ 1.48
CYP46A1Q9Y6A2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.29■■□□□ 1.48
CYP46A1Q9Y6A2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CYP46A1Q9Y6A2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
CYP46A1Q9Y6A2 MYCNOS-205ENST00000641950 531 ntBASIC24.29■■□□□ 1.48
CYP46A1Q9Y6A2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CYP46A1Q9Y6A2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CYP46A1Q9Y6A2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CYP46A1Q9Y6A2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CYP46A1Q9Y6A2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CYP46A1Q9Y6A2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC24.29■■□□□ 1.48
CYP46A1Q9Y6A2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
CYP46A1Q9Y6A2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CYP46A1Q9Y6A2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC24.29■■□□□ 1.48
CYP46A1Q9Y6A2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC24.28■■□□□ 1.48
CYP46A1Q9Y6A2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CYP46A1Q9Y6A2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CYP46A1Q9Y6A2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC24.28■■□□□ 1.48
CYP46A1Q9Y6A2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.28■■□□□ 1.48
CYP46A1Q9Y6A2 AC007322.3-201ENST00000426526 701 ntBASIC24.28■■□□□ 1.48
CYP46A1Q9Y6A2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC24.28■■□□□ 1.48
CYP46A1Q9Y6A2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC24.28■■□□□ 1.48
CYP46A1Q9Y6A2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms