Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA11Q9Y5H2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA11Q9Y5H2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA11Q9Y5H2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
PCDHGA11Q9Y5H2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PCDHGA11Q9Y5H2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
PCDHGA11Q9Y5H2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA11Q9Y5H2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA11Q9Y5H2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA11Q9Y5H2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA11Q9Y5H2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA11Q9Y5H2 KRT18P61-201ENST00000585825 1298 ntBASIC19.85■□□□□ 0.77
PCDHGA11Q9Y5H2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHGA11Q9Y5H2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA11Q9Y5H2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA11Q9Y5H2 AC007225.1-201ENST00000566331 1836 ntBASIC19.85■□□□□ 0.77
PCDHGA11Q9Y5H2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
PCDHGA11Q9Y5H2 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA11Q9Y5H2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHGA11Q9Y5H2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA11Q9Y5H2 AC116050.2-201ENST00000612102 1779 ntBASIC19.85■□□□□ 0.77
PCDHGA11Q9Y5H2 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA11Q9Y5H2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA11Q9Y5H2 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA11Q9Y5H2 AL391422.3-201ENST00000603791 2761 ntBASIC19.84■□□□□ 0.77
PCDHGA11Q9Y5H2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA11Q9Y5H2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDHGA11Q9Y5H2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA11Q9Y5H2 AC019069.1-201ENST00000610008 1333 ntBASIC19.84■□□□□ 0.77
PCDHGA11Q9Y5H2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA11Q9Y5H2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA11Q9Y5H2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA11Q9Y5H2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.84■□□□□ 0.77
PCDHGA11Q9Y5H2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA11Q9Y5H2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHGA11Q9Y5H2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.84■□□□□ 0.77
PCDHGA11Q9Y5H2 AC087623.3-201ENST00000607047 1098 ntBASIC19.84■□□□□ 0.77
PCDHGA11Q9Y5H2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PCDHGA11Q9Y5H2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA11Q9Y5H2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PCDHGA11Q9Y5H2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PCDHGA11Q9Y5H2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDHGA11Q9Y5H2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
PCDHGA11Q9Y5H2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA11Q9Y5H2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA11Q9Y5H2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
PCDHGA11Q9Y5H2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.84■□□□□ 0.77
PCDHGA11Q9Y5H2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PCDHGA11Q9Y5H2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA11Q9Y5H2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA11Q9Y5H2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PCDHGA11Q9Y5H2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDHGA11Q9Y5H2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
PCDHGA11Q9Y5H2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHGA11Q9Y5H2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHGA11Q9Y5H2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
PCDHGA11Q9Y5H2 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHGA11Q9Y5H2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHGA11Q9Y5H2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHGA11Q9Y5H2 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHGA11Q9Y5H2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHGA11Q9Y5H2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHGA11Q9Y5H2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.83■□□□□ 0.77
PCDHGA11Q9Y5H2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDHGA11Q9Y5H2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDHGA11Q9Y5H2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.83■□□□□ 0.77
PCDHGA11Q9Y5H2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.83■□□□□ 0.77
PCDHGA11Q9Y5H2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.83■□□□□ 0.77
PCDHGA11Q9Y5H2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.83■□□□□ 0.77
PCDHGA11Q9Y5H2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHGA11Q9Y5H2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.83■□□□□ 0.76
PCDHGA11Q9Y5H2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
PCDHGA11Q9Y5H2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
PCDHGA11Q9Y5H2 RBM17P2-201ENST00000616397 1405 ntBASIC19.83■□□□□ 0.76
PCDHGA11Q9Y5H2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHGA11Q9Y5H2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHGA11Q9Y5H2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHGA11Q9Y5H2 AC007952.6-201ENST00000573168 2673 ntBASIC19.82■□□□□ 0.76
PCDHGA11Q9Y5H2 AC003957.1-201ENST00000625108 2673 ntBASIC19.82■□□□□ 0.76
PCDHGA11Q9Y5H2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA11Q9Y5H2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA11Q9Y5H2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA11Q9Y5H2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA11Q9Y5H2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA11Q9Y5H2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PCDHGA11Q9Y5H2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA11Q9Y5H2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA11Q9Y5H2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA11Q9Y5H2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHGA11Q9Y5H2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.82■□□□□ 0.76
PCDHGA11Q9Y5H2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHGA11Q9Y5H2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.82■□□□□ 0.76
PCDHGA11Q9Y5H2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHGA11Q9Y5H2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA11Q9Y5H2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA11Q9Y5H2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHGA11Q9Y5H2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA11Q9Y5H2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA11Q9Y5H2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA11Q9Y5H2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms