Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHGC4Q9Y5F7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGC4Q9Y5F7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDHGC4Q9Y5F7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PCDHGC4Q9Y5F7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.71■□□□□ 0.91
PCDHGC4Q9Y5F7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHGC4Q9Y5F7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHGC4Q9Y5F7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGC4Q9Y5F7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGC4Q9Y5F7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGC4Q9Y5F7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PCDHGC4Q9Y5F7 GUSBP6-202ENST00000438529 1198 ntBASIC20.71■□□□□ 0.91
PCDHGC4Q9Y5F7 TSPY6P-201ENST00000448518 926 ntBASIC20.71■□□□□ 0.91
PCDHGC4Q9Y5F7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.71■□□□□ 0.91
PCDHGC4Q9Y5F7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHGC4Q9Y5F7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDHGC4Q9Y5F7 AC104771.1-201ENST00000603335 964 ntBASIC20.71■□□□□ 0.91
PCDHGC4Q9Y5F7 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDHGC4Q9Y5F7 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.71■□□□□ 0.91
PCDHGC4Q9Y5F7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDHGC4Q9Y5F7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGC4Q9Y5F7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDHGC4Q9Y5F7 AC027702.1-201ENST00000563810 1770 ntBASIC20.71■□□□□ 0.91
PCDHGC4Q9Y5F7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
PCDHGC4Q9Y5F7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGC4Q9Y5F7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PCDHGC4Q9Y5F7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGC4Q9Y5F7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGC4Q9Y5F7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
PCDHGC4Q9Y5F7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGC4Q9Y5F7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGC4Q9Y5F7 CYP21A1P-202ENST00000354927 1481 ntBASIC20.7■□□□□ 0.9
PCDHGC4Q9Y5F7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHGC4Q9Y5F7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGC4Q9Y5F7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGC4Q9Y5F7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHGC4Q9Y5F7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGC4Q9Y5F7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGC4Q9Y5F7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHGC4Q9Y5F7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGC4Q9Y5F7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHGC4Q9Y5F7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.7■□□□□ 0.9
PCDHGC4Q9Y5F7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
PCDHGC4Q9Y5F7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
PCDHGC4Q9Y5F7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGC4Q9Y5F7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGC4Q9Y5F7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGC4Q9Y5F7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGC4Q9Y5F7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGC4Q9Y5F7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 AC100791.3-201ENST00000617619 330 ntBASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGC4Q9Y5F7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDHGC4Q9Y5F7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGC4Q9Y5F7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHGC4Q9Y5F7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDHGC4Q9Y5F7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGC4Q9Y5F7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGC4Q9Y5F7 MCRIP2P1-201ENST00000394346 511 ntBASIC20.68■□□□□ 0.9
PCDHGC4Q9Y5F7 SLC29A4P1-201ENST00000398760 971 ntBASIC20.68■□□□□ 0.9
PCDHGC4Q9Y5F7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.68■□□□□ 0.9
PCDHGC4Q9Y5F7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
PCDHGC4Q9Y5F7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHGC4Q9Y5F7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGC4Q9Y5F7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.68■□□□□ 0.9
PCDHGC4Q9Y5F7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHGC4Q9Y5F7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGC4Q9Y5F7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGC4Q9Y5F7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGC4Q9Y5F7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHGC4Q9Y5F7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PCDHGC4Q9Y5F7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms