Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERGIC3Q9Y282 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ERGIC3Q9Y282 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERGIC3Q9Y282 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.68■□□□□ 0.58
ERGIC3Q9Y282 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ERGIC3Q9Y282 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERGIC3Q9Y282 AC006455.2-201ENST00000429931 906 ntBASIC18.68■□□□□ 0.58
ERGIC3Q9Y282 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERGIC3Q9Y282 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.68■□□□□ 0.58
ERGIC3Q9Y282 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.68■□□□□ 0.58
ERGIC3Q9Y282 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERGIC3Q9Y282 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.68■□□□□ 0.58
ERGIC3Q9Y282 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.68■□□□□ 0.58
ERGIC3Q9Y282 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.68■□□□□ 0.58
ERGIC3Q9Y282 NEFHP1-201ENST00000412845 2629 ntBASIC18.68■□□□□ 0.58
ERGIC3Q9Y282 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.68■□□□□ 0.58
ERGIC3Q9Y282 AC112907.3-201ENST00000577781 2400 ntBASIC18.68■□□□□ 0.58
ERGIC3Q9Y282 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERGIC3Q9Y282 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERGIC3Q9Y282 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERGIC3Q9Y282 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ERGIC3Q9Y282 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERGIC3Q9Y282 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.67■□□□□ 0.58
ERGIC3Q9Y282 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
ERGIC3Q9Y282 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.67■□□□□ 0.58
ERGIC3Q9Y282 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ERGIC3Q9Y282 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.67■□□□□ 0.58
ERGIC3Q9Y282 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERGIC3Q9Y282 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.67■□□□□ 0.58
ERGIC3Q9Y282 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ERGIC3Q9Y282 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERGIC3Q9Y282 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.67■□□□□ 0.58
ERGIC3Q9Y282 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERGIC3Q9Y282 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERGIC3Q9Y282 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.66■□□□□ 0.58
ERGIC3Q9Y282 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERGIC3Q9Y282 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERGIC3Q9Y282 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERGIC3Q9Y282 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ERGIC3Q9Y282 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.66■□□□□ 0.58
ERGIC3Q9Y282 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.66■□□□□ 0.58
ERGIC3Q9Y282 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.66■□□□□ 0.58
ERGIC3Q9Y282 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERGIC3Q9Y282 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.66■□□□□ 0.58
ERGIC3Q9Y282 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERGIC3Q9Y282 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERGIC3Q9Y282 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.66■□□□□ 0.58
ERGIC3Q9Y282 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.66■□□□□ 0.58
ERGIC3Q9Y282 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ERGIC3Q9Y282 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERGIC3Q9Y282 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
ERGIC3Q9Y282 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.66■□□□□ 0.58
ERGIC3Q9Y282 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.65■□□□□ 0.58
ERGIC3Q9Y282 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.65■□□□□ 0.58
ERGIC3Q9Y282 AL162377.1-201ENST00000618844 1793 ntBASIC18.65■□□□□ 0.58
ERGIC3Q9Y282 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERGIC3Q9Y282 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERGIC3Q9Y282 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERGIC3Q9Y282 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERGIC3Q9Y282 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ERGIC3Q9Y282 AP006587.3-201ENST00000525742 1516 ntBASIC18.65■□□□□ 0.58
ERGIC3Q9Y282 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ERGIC3Q9Y282 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERGIC3Q9Y282 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERGIC3Q9Y282 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ERGIC3Q9Y282 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERGIC3Q9Y282 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ERGIC3Q9Y282 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERGIC3Q9Y282 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ERGIC3Q9Y282 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
ERGIC3Q9Y282 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERGIC3Q9Y282 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ERGIC3Q9Y282 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERGIC3Q9Y282 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERGIC3Q9Y282 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.65■□□□□ 0.58
ERGIC3Q9Y282 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ERGIC3Q9Y282 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ERGIC3Q9Y282 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
ERGIC3Q9Y282 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.64■□□□□ 0.58
ERGIC3Q9Y282 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ERGIC3Q9Y282 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.64■□□□□ 0.58
ERGIC3Q9Y282 AL512408.1-201ENST00000569378 2000 ntBASIC18.64■□□□□ 0.58
ERGIC3Q9Y282 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERGIC3Q9Y282 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERGIC3Q9Y282 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERGIC3Q9Y282 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERGIC3Q9Y282 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERGIC3Q9Y282 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.64■□□□□ 0.57
ERGIC3Q9Y282 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.64■□□□□ 0.57
ERGIC3Q9Y282 MIR4787-201ENST00000607364 84 ntBASIC18.64■□□□□ 0.57
ERGIC3Q9Y282 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERGIC3Q9Y282 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERGIC3Q9Y282 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERGIC3Q9Y282 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ERGIC3Q9Y282 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERGIC3Q9Y282 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ERGIC3Q9Y282 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ERGIC3Q9Y282 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERGIC3Q9Y282 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERGIC3Q9Y282 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms